Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2708 ATGGATATTCCACGCGCCTCACACCCCGTTATCGATCCCAAAGTAAGGCGCGTTGGTTTCTTCGACCAACCCGAACCCGAATCCCCGCACCTTCCGGACACTCCACCACCCGACCCGGTCTCCTCCGTCATCATGCCGCCTCCACGTCTTCTTTCCGAACGAACCGCCGCCGTTCCTGTTCCCGAGTCCAGGTTCCGACGCCACGAACTCGACGATCAGGTGCCGATTGGGAGTTACAATCCCGCCCAGTGTGTGTTCAGAGCTTCGCCGACGGCTTCGATTACTTCTAGCAGTGTCGGGATCATTGACGGCGAGTTCTCTGAGGATTGCTCTGGTGCCGGATGGTTTCGTGGCAGCGAATTAAGTTTTCCTGACGGAGGGTTGGATTTACCGGCCGTGAAGCCTCATGAAGTTTTGGCGGAGAACAGGTATGATGATGCGGTGAATGTGAATAATCTTCGTCGAGTTACTGAAAAGAAGCACGAGGCTGTGAAAGAAGTATCTCCTGATACGCCATCAGTTTCGCAGCCATTGAAAGCAAAAACTACAAAGGCTGAGAGACGAGCCCTGCAGGAGGCACAAAGAGCTGCAAAAGCTGCTTCTAAAGGTTATACTAATGGAAATTCAGCAGTTGCTGAATCTGGCAAAGCATCCCCAGCGAAAAGTAAAAAGCAGTCTTCACAAAAGAAAGATGGTCCTCCGGTTACATCATCAGTCACTATTTATAAGAAATCTGGGAATCATCCTTTGGAGAAAGAGAGAAAAAAAGATCCCCCTCCTCAACGAATGCAATTTGATGATCAAAACAGAGTGGAAAAAGCTAAACGGCGTGCACTAGTAAATCAAACTGAAGCAAGAAACAGAGTTGAAATATTTCGGCATTTGCCTCAATATGAACATGGGAATCAACTTCCTAATCTTGAGTCTAGGCTTTTCCAACTCGACTCGATGCATCCTGCTGTGTTCAAGGTTGGATTACGTTATATAGCCGGAGATATATCAGGAGTTAATGCTCGATGTACCGAAATGCTTAGAGCGCTTCAGGATGCCATTATAGACTACTCCACTCCGCCTGAAAAAGTACTTATTAGGGATTTAACTGCAAAAATTAATAGTTATGTTTCATTTATTAGCGAATGCCGACCGCTTTCTATTAGCATGGGAAATGCGATTAGGTTTGTGAAGAGTCGAATTGCCAAGTTGCCCTTAAGTTATACTGATACTGAGGCAAAAACAGCTCTTTGTTCTGATATTGACCGATTCATTAATGAAAAAATAATTATTGCGGATAAGGTAATTGTTGGACATGCTATTACCAAAATTAGGGATGGGGATGTTCTTCTTACATATGGATTGTCTTGTGTTGTTGAGATGATTCTCTTGTCTGCTCATGATCTTGGGAAAAAATTCCGAGTTGTGGTGGTTGACTCACGACCAAAGTTTGAAAGTCAGGCCTTACTTGCTAGGCTTATAGCCAAGGGCCTGAGTTGTATGTATACTCATATAAATGCTGTTTCTTATATCATGCACGAGGTTACAAGAGTTTTTCTGGGAGCTTCTGCTGTCATGTCTAATGGAACTGTACTTTCAAAGATTGGGACTGCATGTATTGCAATGGTGGCTCATGAATTTCGTGTTCCCGTATTAATTTGTTGTGAAGCTTTTAAATTTCATGAAAGGGTGCTACTTGATTCAATATGTTGCAACGAATTAGGCGACCCAGATGCTGTTGCTACGGTTCCTGGAAGAATGGATATCAATTATCTGGACAATTGGACAAACAAAGAGAATTTGCAGCTTTTGAATTTGATGTATGATGTTACCCCTTCGGATTACATCTCAGTTATTGTTACAGATCATGGAATGATCCCTCCTACAAGTGTGCCTGTGATCGTACGCGAGTATGGACAAGAGCATTACATTACTTGA 1929 0.4391 MDIPRASHPVIDPKVRRVGFFDQPEPESPHLPDTPPPDPVSSVIMPPPRLLSERTAAVPVPESRFRRHELDDQVPIGSYNPAQCVFRASPTASITSSSVGIIDGEFSEDCSGAGWFRGSELSFPDGGLDLPAVKPHEVLAENRYDDAVNVNNLRRVTEKKHEAVKEVSPDTPSVSQPLKAKTTKAERRALQEAQRAAKAASKGYTNGNSAVAESGKASPAKSKKQSSQKKDGPPVTSSVTIYKKSGNHPLEKERKKDPPPQRMQFDDQNRVEKAKRRALVNQTEARNRVEIFRHLPQYEHGNQLPNLESRLFQLDSMHPAVFKVGLRYIAGDISGVNARCTEMLRALQDAIIDYSTPPEKVLIRDLTAKINSYVSFISECRPLSISMGNAIRFVKSRIAKLPLSYTDTEAKTALCSDIDRFINEKIIIADKVIVGHAITKIRDGDVLLTYGLSCVVEMILLSAHDLGKKFRVVVVDSRPKFESQALLARLIAKGLSCMYTHINAVSYIMHEVTRVFLGASAVMSNGTVLSKIGTACIAMVAHEFRVPVLICCEAFKFHERVLLDSICCNELGDPDAVATVPGRMDINYLDNWTNKENLQLLNLMYDVTPSDYISVIVTDHGMIPPTSVPVIVREYGQEHYIT* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2708 642 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 1 640 - -
Tpr3g2708 642 MobiDBLite consensus disorder prediction 229 244 - -
Tpr3g2708 642 MobiDBLite consensus disorder prediction 201 222 - -
Tpr3g2708 642 MobiDBLite consensus disorder prediction 1 41 - -
Tpr3g2708 642 SUPERFAMILY NagB/RpiA/CoA transferase-like 331 635 IPR037171 -
Tpr3g2708 642 Pfam Initiation factor 2 subunit family 333 625 IPR000649 GO:0044237
Tpr3g2708 642 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 640 - -
Tpr3g2708 642 MobiDBLite consensus disorder prediction 246 274 - -
Tpr3g2708 642 MobiDBLite consensus disorder prediction 160 274 - -
Tpr3g2708 642 Gene3D - 428 635 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2708 Tpr-Chr3 27387066 27392936 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2708 1 641 Eukaryotic Initiation Factors Gene Family AT5G38640 55.506 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2708 K03680 - gmx:100778711 839.721