Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2654 ATGGCTGCAAATTTCAACCGCAACATGACTGAAACCATCATCACAACTCACCCTCATTGGTATTCATCAAAAACTGGAATTTACAGTAGTGTTCATTCTCCTTTGAATCTTCCAACTGACCCTTTTGTTGACATTGTTTCTTTCATTTTTTCACATCCTCATGATGGGGTTTTCGCTCTTATTGATTCCTCATCTGGGTTTTCCATTTCTTACTCAAAGTTGTTACCTTTAGTCAAATCTATGGCTTCTGGTTTACACAAAATGGGTGTTTCACAAGGTGATGTTGTTTTGCTTTTACTTCCAAATTCAATTTACTATCCTGTTATATTATTGGCTGTTTTGTATTTAGGTGCTGTTGTTACACCATTGAATCCGCTTAGTAGTGTTGGCGAAATTCGTAAACAGGTTAATGAGTGTGGTGTGAGTTTTGCTTTTACTGTGTCTGAAAATGTCAAGAAAATAGAGGTTTTATTAGGAATCAAACCCATTATTGCTGTGCCTGAAAATGACAAGGATTTGAGGAATGAGTGTTTTTCATGTTTTTTTAACCTTATTTATGGTAAATTTGATTTACCTCAAAGAGTGGTTATTAGACAGGAAGATACTGCTGGTATATTGTATTCTTCTGGGACCACAGGTGTGAGCAAAGGAGTTGTTTTAACTCATAGAAATCTTATTGCTATGGTTGAGCATTTTGTGAGATTTGAAGCTTCTCAATATGAATACTCTTGTACCAAGAATATGTTTCTAGCTGTTTTGCCAATGTTTCATATATATGGTTTATCGCTTTTTGCTGCTGGATTACTGTCATTGGGTTCTACGATCGTTGTAATGAGGAAATTTGACATTGATGAGGTTGTTAGGGTGATTGACAAATATAATGTTACACACTTTCCTGTTGTTCCACCGATGGTGTCAGCATTGACAGCGAAGGCAAAGGGTGTTAATGGAAGTAAGTTGAAGAGTTTGAGACAGGTCTCCTGCGGTGCAGCGCCTTTGAGCACAGGAGTTATTAATGGTTTTGTCCGTGCTTTCCCCCATGTCGATTTTATACAGGGTTATGGAATGACTGAGTCGACTGCAGTAGGAACACGTGGCTTCAATACTGAAAAGTTTCACAACTATTCTTCAATAGGGTTGTTAGCTCCAAACATGGAGGCAAAAGTGGTAGACTGGAATGGTTCATTGTTGCCCCCAGGCGGCAGCGGTGAGCTTTGGTTGAGAGGGCCTTCAATTATGAAAGGGTACTTGAATAACGAGGAAGCTACAATGTCAACAATTGATAAAGATGGTTGGCTACATACTGGAGATATTGTTCATTTTGATCAGGATGGATATTTACATGTGTCTGACCGATTGAAAGACATTATCAAATATAAGGGCTTTCAGATTGCTCCTGCTGATATAGAAGCCGTGTTAATTATGCATCCTGAAATAGTTGATGTGGCTGTTACAGCTGCGAAAGATGAAGAAACTGGGGAGATTCCAGTGGCGTTTGTGGTCAAGAAGGTTGGAAGTGTACTTTCTCTAAAGCATGTTATCGATTACGTTGCTGAGCAGGTTGCTCCATACAAGAAAGTTCGGAAAGTGTTCTTCACTGACAAGATACCGAGGTCACCAACTGGGAAGATCCTTCGAAAGGAACTCAGGCACTGCTTGATTTCTAAACTCTAA 1674 0.3919 MAANFNRNMTETIITTHPHWYSSKTGIYSSVHSPLNLPTDPFVDIVSFIFSHPHDGVFALIDSSSGFSISYSKLLPLVKSMASGLHKMGVSQGDVVLLLLPNSIYYPVILLAVLYLGAVVTPLNPLSSVGEIRKQVNECGVSFAFTVSENVKKIEVLLGIKPIIAVPENDKDLRNECFSCFFNLIYGKFDLPQRVVIRQEDTAGILYSSGTTGVSKGVVLTHRNLIAMVEHFVRFEASQYEYSCTKNMFLAVLPMFHIYGLSLFAAGLLSLGSTIVVMRKFDIDEVVRVIDKYNVTHFPVVPPMVSALTAKAKGVNGSKLKSLRQVSCGAAPLSTGVINGFVRAFPHVDFIQGYGMTESTAVGTRGFNTEKFHNYSSIGLLAPNMEAKVVDWNGSLLPPGGSGELWLRGPSIMKGYLNNEEATMSTIDKDGWLHTGDIVHFDQDGYLHVSDRLKDIIKYKGFQIAPADIEAVLIMHPEIVDVAVTAAKDEETGEIPVAFVVKKVGSVLSLKHVIDYVAEQVAPYKKVRKVFFTDKIPRSPTGKILRKELRHCLISKL* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2654 557 Pfam AMP-binding enzyme 58 459 IPR000873 -
Tpr3g2654 557 Gene3D - 30 454 IPR042099 -
Tpr3g2654 557 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 14 556 - -
Tpr3g2654 557 Pfam AMP-binding enzyme C-terminal domain 468 543 IPR025110 -
Tpr3g2654 557 ProSitePatterns Putative AMP-binding domain signature. 205 216 IPR020845 -
Tpr3g2654 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 556 - -
Tpr3g2654 557 Gene3D - 455 554 IPR045851 -
Tpr3g2654 557 CDD 4CL 37 549 - -
Tpr3g2654 557 SUPERFAMILY Acetyl-CoA synthetase-like 54 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2654 Tpr-Chr3 26447456 26450509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2654 10 553 Monolignol Biosynthesis Gene Families AT4G19010 61.609 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2654 K01904 - gmx:100804808 852.432