Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2651 ATGTCAAACATGCATTACATTTTGAGCATGTTATCATTTCTTCTTCTTGTAGAAAATCTCAGCACAATACATTGTCATACAAAGGGAATTCGACACAAACATTCTTCAGGAAACAGTTTATCAACAACCAATACAACAACAACAGAGTTAGCAGAACAACAATTCATGAAATGGGTGAGTTTTGTTGGTGGTCTTAAACACACAGTTTTCAAGACTGCAAAAAATAAGCTCTTTGCTTCTTATACTTTGCACGTTGATAAAAATCCTTCTTTGGGAGATTTTGCAACAATTCAAGAAGCCATTGATTCTCTTCCTTCTATAAATCTTGTTAGAGTTGTCATCAAGGTTCATGCAGGTGTTTACTCGGAGAAAGTTAACATTCCTCCATTAAAATCGTTCATAACCATAGAAGGAGATGGAGCAGATACAACAATTGTTCAATGGGGTGACACTGCTCAAACACCAGGTCCAAGAGGGAATCCAATGGGAACATATGGTTCAGCAACTTTTGCAGTTAATTCACCTTATTTCATTGCTAAAAACATCACATTCCAAAACACATTTCCTGTTCCTGCACCTGGAGCAATTGGAAAACAAGCAGTGGCATTTAGAATTTCAGCAGACACAGCATCATTCTCAGGCTGCAAATTTTTAGGTGCACAAGATACACTTTATGATCATATTGGTAGACATTACTATAAAGATTGTTACATTGAAGGTTCTGTTGATTTCATCTTTGGCAATGCTCTCTCCTTATTTGAGGGATGTCACGTGCATGCAATAGCAAGAAATACAGGTGCATTAACAGCACAAGGAAGGAGCAGCATGTTACAAGACACAGGTTTCTCATTTGTGAACTGTAAAGTGACAGGTTCAGGGGCACTATACCTTGGAAGAGCTTGGGGTCCTTTTTCACGAGTTGTCTTTGCTTATACATATATGGACAATATTATCATTCCTAAAGGATGGTATAATTGGGGTGATCCTAACCGTGAAATGACTGTGTTCTATGGACAATACAAATGCACAGGAGCTGGAGCAAACTTTGCAGGGAGAGTATCATGGTCAAGAGAACTCACTGATGAGGAAGCTAGACCTTTTCTTTCACTTACTTTTATTGATGGGACTGAATGGATCAATTTTTAG 1146 0.3805 MSNMHYILSMLSFLLLVENLSTIHCHTKGIRHKHSSGNSLSTTNTTTTELAEQQFMKWVSFVGGLKHTVFKTAKNKLFASYTLHVDKNPSLGDFATIQEAIDSLPSINLVRVVIKVHAGVYSEKVNIPPLKSFITIEGDGADTTIVQWGDTAQTPGPRGNPMGTYGSATFAVNSPYFIAKNITFQNTFPVPAPGAIGKQAVAFRISADTASFSGCKFLGAQDTLYDHIGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIARNTGALTAQGRSSMLQDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGAGANFAGRVSWSRELTDEEARPFLSLTFIDGTEWINF* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2651 381 PANTHER PECTINESTERASE 7 380 - -
Tpr3g2651 381 SUPERFAMILY Pectin lyase-like 79 380 IPR011050 -
Tpr3g2651 381 Gene3D - 78 381 IPR012334 -
Tpr3g2651 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 380 - -
Tpr3g2651 381 Pfam Pectinesterase 92 375 IPR000070 GO:0030599|GO:0042545
Tpr3g2651 381 ProSitePatterns Pectinesterase signature 2. 238 247 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2651 Tpr-Chr3 26411739 26415852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2651 4 379 Carbohydrate Esterase AT5G47500 41.910 5.63e-100 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2651 K01051 - gmx:100793314 653.284