Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2645 ATGGTTCAACCTTCGTTCGTTCAGATTCAGTTCTTTGTATTGAACCTTCAAGCTTCAGATTCGTTCTCTGATTTCACCTTCATTCAACCTTCTCCTCAGATTCTTTCAACCTTCAACTTCAATCTTCAAAATCCAGAAACTGATATTGTAGCAGTAGGAGAACAAATATACACTAGCTATTATTCTCCGATAGGAGCTAGAGTGAAATGTCTCTCATATGTTGGTTACTTTATCAACGCAAGGGTGCCTCTGGAACACAAACACATTGAACTATTCTTCAGTCAAATTGTTACAAGACATGGCTCTGCACGGAATTTGCCTAGATCAAGCACTTCAAGACTCAGTCCAAGGCTGGGTTTTGATAGTTTTGAAGATGGAATGTTAATTTTCCCTTTGGATTCTGCTTGA 408 0.3873 MVQPSFVQIQFFVLNLQASDSFSDFTFIQPSPQILSTFNFNLQNPETDIVAVGEQIYTSYYSPIGARVKCLSYVGYFINARVPLEHKHIELFFSQIVTRHGSARNLPRSSTSRLSPRLGFDSFEDGMLIFPLDSA* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2645 135 PANTHER NOTUM-RELATED 63 120 IPR004963 GO:0016787
Tpr3g2645 135 Pfam Pectinacetylesterase 63 115 IPR004963 GO:0016787
Tpr3g2645 135 PANTHER PECTIN ACETYLESTERASE 63 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2645 Tpr-Chr3 26330140 26334245 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2645 63 120 Carbohydrate Esterase AT4G19420 51.724 3.49e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2645 K19882 - gmx:100776478 70.0922