Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2622 ATGGAGATAGAGCAAAACATAGATAATGATGTTGGGAAGAATGAAATGATGAAAGGTGTTTCAAAAAGAGGGATGCATCTAGTGTGGGAAGATTTGAGTGTTGTAATTCCAAATTTTGGGAATGGACACACAAAGAGATTGCTTAACGGTTTGAATGGATATGCTGAACCAAACAGAATCATGGCTGTTATGGGTCCATCTGGCTCTGGAAAATCTACTCTTCTTGATGCTTTGGCAGGTAGACTCTCTGGAAATGTTATCATGTCTGGAAAAGTGCTTTTAAATGGAAAGAAAAGACGATTAGACTATGGGGGTGTAGCTTATGTAACACAAGAAGACATATTGTTGGGAACACTGACAGTTAAAGAGACAATATCATATTCAGCAAATTTAAGGCTTCCATCTAGCATGACAAAAGAAGAGGTAAATGACATTGTAGAGGGAACAATTATGGAAATGGGTCTTCAAGATTGTGCGAATAGACTTATAGGAAATTGGCACTTAAGAGGTATAAGTGGTGGAGAAAAGAAAAGATTAAGCATAGCACTTGAAATCTTAACAAGACCTTCTCTTTTGTTCCTTGATGAACCTACAAGTGGTTTGGATAGTGCCTCAGCATATTTTGTTGCTCAAACTTTGAGAAACATAGCTCATGATGGAAAAACTGTTATTTCTTCTATTCACCAACCAAGTAGTGAGGTTTTTGCATTATTTGACGATCTCTTTCTACTTTCTGGAGGACAAATAATTTACTTTGGACCAGCTGATAAAGCAGTTGAGTTCTTTGGCAAAGCAGGATTTCCATGTCCAAGTAGAAGAAACCCTTCTGATCATTTCCTCCGTTGTATTAATTCAGACTTCGACACTGTCACAACTACTATGGCCTCCCGGAGTACACATGAACCAAAAACACTAGCACCATCAATAATGAACTTACCAACAGCAGCAATCAAAGCAATACTCATCGAGAAATACCGTTGGTCAGAATATGCAATTTGTGCAAGAGCAAGAATCAAAGAAATCTCAAACTTTGAAGGACATGATTATGAAAGTAAAATCAAGAGCCAAGCAAAATGGTGGAAGCAATTATCAACTTTGACACATAGATCTTTTGTGAACATGTCTAGAGATATAGGGTACTATTGGATAAGGTTAACAATCTATGTCACCTTATCTTTGTCTGTCGGAACAATCTTTTTTGACGTTGGATCAAGTTATAGATCAATTTTCGCAAGAGGAGCTTGTGGCGCCTTTATATCAGGTTTCATGACATTCATGTCCATAGGAGGCTTCCCATCATTCATAGAAGAAATGAAGGTCTTCTACAAAGAAAGGCTCAATGGATATTATGGAATTGCAGTCTACATTCTGTCAAATTTTCTCTCTTCATTTCCTTTTGTAGCAGTAATGTCATTTGCTACCGGGACTATAACATATTATATGGTTAAATTTCGCCCCGGGTTTTCACATCTTCTGTATATCTGTTTGGATCTTTTGGGCTGTATCGCGGTTGTGGAGACCTCAATGATGATTATAGCTGCATTGGTTCCCAACTTTCTTATGGGATTGATAATTGGAGCAGGATATATTGGTCTTATGATGATGACTGCTGGCTATTTTCGGCAGATCTACGATCTTCCTAAATTCTTCTGGCGTTACCCTATTTCATACATCAATTACGGCGCATGGGGATTGCAGGGAGCATTCAAGAATGACTTGATAGGAATGGAGTTTGATCCTATGATACCTGGTGGTCCAAAACTTAAAGGAGAAATAATCCTCACAACAATGCTTGGAATGAAAGTTGATTATTCAAAATGGTGGGATCTAGCTATGGTCATCTTCATCCTCATGTTGCTTAGAGTTATTTTCTTTTTCATTCTAAAATTTAAGGAGAGAGCTGTACCTTTTCTTCACAGTATTTACACAAAGCAAACACTGGAACGTATCAAGAAGCGGCCTTCGTTCAGGAAAACACCATCATTCGCTTCAAAGAGACACCAACCACTGCATCCATTGTCTTCTCAAGAGGGTCTCAACTCTCCAAGTTATTAG 2055 0.3815 MEIEQNIDNDVGKNEMMKGVSKRGMHLVWEDLSVVIPNFGNGHTKRLLNGLNGYAEPNRIMAVMGPSGSGKSTLLDALAGRLSGNVIMSGKVLLNGKKRRLDYGGVAYVTQEDILLGTLTVKETISYSANLRLPSSMTKEEVNDIVEGTIMEMGLQDCANRLIGNWHLRGISGGEKKRLSIALEILTRPSLLFLDEPTSGLDSASAYFVAQTLRNIAHDGKTVISSIHQPSSEVFALFDDLFLLSGGQIIYFGPADKAVEFFGKAGFPCPSRRNPSDHFLRCINSDFDTVTTTMASRSTHEPKTLAPSIMNLPTAAIKAILIEKYRWSEYAICARARIKEISNFEGHDYESKIKSQAKWWKQLSTLTHRSFVNMSRDIGYYWIRLTIYVTLSLSVGTIFFDVGSSYRSIFARGACGAFISGFMTFMSIGGFPSFIEEMKVFYKERLNGYYGIAVYILSNFLSSFPFVAVMSFATGTITYYMVKFRPGFSHLLYICLDLLGCIAVVETSMMIIAALVPNFLMGLIIGAGYIGLMMMTAGYFRQIYDLPKFFWRYPISYINYGAWGLQGAFKNDLIGMEFDPMIPGGPKLKGEIILTTMLGMKVDYSKWWDLAMVIFILMLLRVIFFFILKFKERAVPFLHSIYTKQTLERIKKRPSFRKTPSFASKRHQPLHPLSSQEGLNSPSY* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2622 684 MobiDBLite consensus disorder prediction 654 684 - -
Tpr3g2622 684 ProSitePatterns ABC transporters family signature. 171 185 IPR017871 GO:0005524
Tpr3g2622 684 Gene3D - 15 265 IPR027417 -
Tpr3g2622 684 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 27 271 IPR003439 GO:0005524
Tpr3g2622 684 Pfam ABC transporter 48 199 IPR003439 GO:0005524
Tpr3g2622 684 CDD ABCG_EPDR 24 253 - -
Tpr3g2622 684 MobiDBLite consensus disorder prediction 668 684 - -
Tpr3g2622 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 268 IPR027417 -
Tpr3g2622 684 Pfam ABC-2 type transporter 228 285 IPR043926 GO:0140359
Tpr3g2622 684 Pfam ABC-2 type transporter 362 571 IPR013525 GO:0016020|GO:0140359
Tpr3g2622 684 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 22 679 - -
Tpr3g2622 684 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 22 679 - -
Tpr3g2622 684 SMART AAA_5 57 256 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2622 Tpr-Chr3 25779960 25788256 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2622 46 242 Calmodulin-binding Proteins AT2G36910 30.275 2.42e-12 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2622 3 25779960 25788256 Tpr3g2622 3 25779960 25788256 ECH