Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2621 ATGGAGATTGAAGCAGCAAGTGGTAGCAACAACAAAAGATGCAACATGGATGAGAATGAAGATGAAACATATTGTGGTATGGATAGAGGAAGTTTTTTAGCATGGGAAGATTTAAGAGTTATGTTGCCAAATTTTGGAAAAGGACCAACTAAAAGGTTACTTAATGGGCTTAATGGTTTTGCTGAGCCTGGTAAAATCATGGCTATTATGGGCCCTTCTGGCTCTGGAAAATCCACTTTGCTTGATTCACTTGCAGGTAGACTCTCAAAAAATGTGGTCATGACAGGAAATGTTCTTATCAATGGGAAGAAAAAAAATCCAGGCTATGGTTTTGTTGCATACGTAACACAAGAGGATGTGTTAATGGGAACACTTACAGTAAGGGAAACAATAACATATTCAGCACACCTACGTCTTCCAACATCGATGCCCAAAGAAGAAGTTGACGACATAATCGAAGGAACAATCACAGAAATGGGTCTTCACGATTGCGCTGATACGTTAATAGGTAACTGGCATTTGAGAGGTATAAGTGGTGGTGAAAGGAAAAGAACTAGCATTGCACTTGAGATTCTCACAAGGCCTCGATTATTGTTTCTCGATGAACCTACCAGTGGTTTAGATAGCGCCTCTGCGTTTTTTGTTGTTCAAACTCTTAGAAATGTTGCTCGCGATGGAAGGACTGTTATTTCTTCTATTCATCAGCCAAGTAGTGAAGTCTTTGCACTTTTTGATGATCTTTTCTTGCTCTCTAGTGGCGAAACTGTTTATTTTGGTGAAGCCAAAAAGGCAATAGAGTTTTTTGCTGAGGCCGGTTTCCCTTGTCCGCGTAAAAGAAATCCTTCTGATCACTTCCTAAGATGTATCAATTCTGATTTCGACGTTGTCACGGCTACACTAAAGGGATCTCAAAGAATTCCTGATGTTCCAAATTCAGCAGATCCTTTCGAGAATTTGGCTACAGCACAGATTAAGTCAATGCTAGTTGAGAGATTCAGGCGTTCGTCATACGCCAAAAGGTTAAAAGACAAGATTCAAGAACTATCAACCCATGAAGGGCTTGAAGCTGAGACACAACTTGGAAGCCAAGCTAGTTGGTGGAAGCAACTCACTACATTGACAAGGAGATCATTTGTGAACATGTCTAGAGATGTTGGTTACTATTGGTTGAGGATTATAATCTACATCATTGTATCTATATGTGTTGGAACAATCTATTTTGATGTTGGCTATAGCTATACTTCCATCTTGGCTCGTGGCGCATGTGGTGCATTTATATCAGGGTTTATGACTTTCATGTCAATTGGAGGCTTTCCATCTTTCATTGAAGAAATGAAGGTTTTTTATCGCGAAAGGATGAATGGATATTACGGTGTAGCAGCATATATTTTAGCAAACTTTCTATCATCATTCCCATTCTTGGTTGCTATTGCTCTTACTTCTAGCACAATCACATATAACATGGTGAAATTCAGGCCAGGATTCATTCACTTTGTGTTTTTCACTCTGAATATCTATGGCTGTATCTCAGTGATTGAGAGTCTCATGATGGTTGTAGCTTCACTTGTTCCAAATTTCCTCATGGGGATCATTACAGGAGCTGGAATCATTGGAATCATGATGATGACCTCTGGATTCTTTAGGTTACTATCTGATCTTCCAAAAGCGGTTTGGCGCTATCCGATTTCATATATTAGTTATGGTGCATGGGCGATACAGGGTTCATACAAGAATGACTTACTTGGACTAGAGTTTGATCCACTAATCCCTGGTGATCCAAAACTAACAGGAGAATATGTGATAACACACATGTTAGGGATTGAATTAAGCCATTCCAAATGGTGGGACTTAACAGCACTTTTAATCATTCTCATATGTTACAGGCTACTTTTCTTTATTATTCTCAAGTTCAAAGAAAGAGCATCACCATTATTTAAAACACTTTATGCCAAAAGAACCATACAACAGCTTGAAAAAAGACCTTCTTTTAGGAACATGCCAAATTTTCCTTCACTAAGGCATCAACCACTTCATTCACTATCTTCTCAAGAGGGTCTTAATTCTCCACTCCACAACTAG 2079 0.3901 MEIEAASGSNNKRCNMDENEDETYCGMDRGSFLAWEDLRVMLPNFGKGPTKRLLNGLNGFAEPGKIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNVLINGKKKNPGYGFVAYVTQEDVLMGTLTVRETITYSAHLRLPTSMPKEEVDDIIEGTITEMGLHDCADTLIGNWHLRGISGGERKRTSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSSGETVYFGEAKKAIEFFAEAGFPCPRKRNPSDHFLRCINSDFDVVTATLKGSQRIPDVPNSADPFENLATAQIKSMLVERFRRSSYAKRLKDKIQELSTHEGLEAETQLGSQASWWKQLTTLTRRSFVNMSRDVGYYWLRIIIYIIVSICVGTIYFDVGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERMNGYYGVAAYILANFLSSFPFLVAIALTSSTITYNMVKFRPGFIHFVFFTLNIYGCISVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLSDLPKAVWRYPISYISYGAWAIQGSYKNDLLGLEFDPLIPGDPKLTGEYVITHMLGIELSHSKWWDLTALLIILICYRLLFFIILKFKERASPLFKTLYAKRTIQQLEKRPSFRNMPNFPSLRHQPLHSLSSQEGLNSPLHN* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2621 692 Pfam ABC-2 type transporter 369 578 IPR013525 GO:0016020|GO:0140359
Tpr3g2621 692 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 269 IPR027417 -
Tpr3g2621 692 SMART AAA_5 63 234 IPR003593 -
Tpr3g2621 692 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 29 686 - -
Tpr3g2621 692 Pfam ABC transporter 56 205 IPR003439 GO:0005524
Tpr3g2621 692 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 29 686 - -
Tpr3g2621 692 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 277 IPR003439 GO:0005524
Tpr3g2621 692 CDD ABCG_EPDR 30 259 - -
Tpr3g2621 692 Gene3D - 33 271 IPR027417 -
Tpr3g2621 692 Pfam ABC-2 type transporter 234 290 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2621 Tpr-Chr3 25731085 25738504 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2621 20 278 Calmodulin-binding Proteins AT2G36910 27.402 5.89e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2621 K05681 - gmx:100807692 1172.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2621 3 25731085 25738504 Tpr3g2621 3 25731085 25738504 ECH
Tpr1g3940 1 43748831 43760353 Tpr3g2621 3 25731085 25738504 ECH