Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2611 ATGGTAAAATTTGATGAATCTCTAGATGTTGATTCTAATGAAGTTAGTTCAACTGATAGTCATACATCTGATGATGAGAATTCCAGCTATTCGGCATCCAGTGGGCATGATAGGTCAGATGATGGCGATGATCATGGTGACCACCATGATGATGGTGATGATGATGATGATGATGATGATGATGATGGCAATGACCATGATTTTGCTGATGAAGCATCTATAGGTGAAAGAGCGGTACGTATTAATTCTATGACTGCTGATGAAATTCGTGGTATGGATTTTGGTAGTGTTGACGAAGCTTATGAATTTTATTATCAATACGGTAAATGTAAAGGTTTTTCCGTTAGGAAAAGTGATGATAAGAAAAAAATAGGGCCTGATGGTAGTAAAATAATAACAAACAAGCTTTTTGTATGCAGTAGACAAGGTTTACGAGATAAGAGACACATATCTAGGTTAGATAGGAAAAGAGAGCACCGACGTTTGACACGTACGAAATGCACGGCTAGGTTTCGTGTGACATACAAAGCCGATAAGGGTAGATTTGTAGTGTCTGTGTTTGAAGAGACTCATAACCATGAATTAACATCAGCTAGGTTTGTGCACTTACACCCGGTTTATCGTAAGATTAGCGAAGCAGATAGAGCTCAGGTTGATGGTATGCAGTCACGTGGAATTAGAACTTGTCATATTATGGGGTACATGGTTGCTCAGAAGGGTGGATATGGTGGTGTTGGGTTTACGAAGAAAGATCTTTATAATTATTTTGATAAAAAAATGCGTGATATTGTTAAAGATGGTGATGTTGCCGCATCGCTACATTATCTTAATGCAAAGTCAGCTACTGATCCCATGCTCTATGCTGAATATGCTGCTGACACTAGCAATGGACGGATGAAGTCTCTTTTTTGGGCTGATGGGACTAGTAGATCTGACTACTTCTGTTTTGGAGATGTGGTTGCATTTGACACAACATACAAGAGGAACAAATACAACCTCCCGCTGGTTATATTTTCAGGTTGTAACCACCATTCCCAAACAATAATTTTTGGCGCTGCGTTGGTATCAGATGAAACCACGGAGACGTATAAGTGGGTGTTGAATTGTTTTTTGGAGTGTATGGAAAATAAACGCCCAAAAGCTGTGGTGACAGATGGAGATGGGGCTATGAGAGAGGCTATAAAAGAGGTTTTCCCCGATTCGACTCATCGGTTATGTGCCTGGCATTTGAATAAGAATGCAGGTGAGAATGTGAAGAATTCAGGTTTTCTGAAGGGATTTAAAAAAGCCATGTTCTCAAATTTTTCAAAGGATGATTTTGAAGAGTATTGGTCAGAGATGATTAAAGAAAATGGAGTTGAAGGACATCCGTGGGTTATCAAAACCTACGAGAACAAGTTACTATGGGCAACTGCATACCTGCGGGATAAGTTTTTTGGACGTATAAGAACTACGTCCCAATGTGAAGCAATCAATGCAATAATAAAGAGTTATGTCAGAAAGAAAGGATGCATCTTTGAATTTATGCAAAATTTTGAGCAGGCTCTAAGAGGCTACAGAAACAATGAACTTGTTGAAGATTTTAAGTCAAAGTTTTCAGAACCTGTGTTGACAACTCAACTACGTTTGATTGAGAGCAATGCCGCTAAAATCTATACAGCGGAGATTTTCAAAGAAGTGAAAGAAGAAATTATGAAGGCCGGTGAATTGATTGTTAAGCATAAAAAGGAAATTGGAGATACAAAGTTTTATACTTTGACTAAATATTGTCGGGATGCGTATGAAAGAACAGTTGTTTACGATGGTGATACATTCCAATGTTCGTGCAGGTTGTTTGATTCTCGTGGACTTCCTTGTTCTCATATTTTTCATGTGATGAAGGAAGAACATGTTGATCACATTCCTAGCACTTTGGTATTGTCGCGATGGACCAAGGATGCTAAAATTGATTATTTGAACATGGTGGATGTTAATGATCCAGTTGATTCCGATGTGATTGAGCTTGCCCGTTTTGGTGCATATTGTTCTGTTCTGACATCATTTTGCAAAGAAGCTTCTAAAAAGAATGGTGTGTATGGTGACATTATGGATGACCTCATGAATTTAAAAAAAAAATATTGCAGTGTTGAGGATCCTATTGGAACACAAAAGTCAGTTGTTGGTGATCCTATCCCGGTTCAGAGTAAAGGTGCTCCAAAGAAAAAAAAGAATGACGCAAAAGCTCTCAGGCATTGTACTCATTGCAAGAGTACAACTCATAATGCGAGGACTTGTTCGGACAAAAAGAGAAAAAAAAGTTGCAACGCTGAAAGTAGTGTGCAAGACATAAATTCAGAGCTACCGGTTGACCTTGGTGAAAGTAGTGTGCGACAGAATAAGAAGAAATGTGTAGAGCAACCGAAAGACCTTTGCGAAAGTAGTGTGGCACCAAAAAAGAAGAAATGTTCAGAGCTACCGAAAGACCTTTGTGAAAGTATTGTGCAAAAGAGAAATAAATGTTCGGTGCAATTGAAAGAGCGTGGCGCTAATGTGTCAACACCAACACATATTGATGTTACTAGTGCGACCGGGCAATTCACTCCGATGTATGGATTTCAACATATGATTCCTATGTTACATCCGGTTATGCAACAGATGCACGTACCATCTGGACAACATGTTCCACCTGCACAACATGTAACTTCTGTACCACATGTACCACCTCTATACCAACTGTATGGAATGAATGTTGGTGCAAATTCAACTTCGTGTTATGGTCTGTTACAACAGGTGATGAAATCTGCTGATGGTAAACAATGA 2799 0.3898 MVKFDESLDVDSNEVSSTDSHTSDDENSSYSASSGHDRSDDGDDHGDHHDDGDDDDDDDDDDGNDHDFADEASIGERAVRINSMTADEIRGMDFGSVDEAYEFYYQYGKCKGFSVRKSDDKKKIGPDGSKIITNKLFVCSRQGLRDKRHISRLDRKREHRRLTRTKCTARFRVTYKADKGRFVVSVFEETHNHELTSARFVHLHPVYRKISEADRAQVDGMQSRGIRTCHIMGYMVAQKGGYGGVGFTKKDLYNYFDKKMRDIVKDGDVAASLHYLNAKSATDPMLYAEYAADTSNGRMKSLFWADGTSRSDYFCFGDVVAFDTTYKRNKYNLPLVIFSGCNHHSQTIIFGAALVSDETTETYKWVLNCFLECMENKRPKAVVTDGDGAMREAIKEVFPDSTHRLCAWHLNKNAGENVKNSGFLKGFKKAMFSNFSKDDFEEYWSEMIKENGVEGHPWVIKTYENKLLWATAYLRDKFFGRIRTTSQCEAINAIIKSYVRKKGCIFEFMQNFEQALRGYRNNELVEDFKSKFSEPVLTTQLRLIESNAAKIYTAEIFKEVKEEIMKAGELIVKHKKEIGDTKFYTLTKYCRDAYERTVVYDGDTFQCSCRLFDSRGLPCSHIFHVMKEEHVDHIPSTLVLSRWTKDAKIDYLNMVDVNDPVDSDVIELARFGAYCSVLTSFCKEASKKNGVYGDIMDDLMNLKKKYCSVEDPIGTQKSVVGDPIPVQSKGAPKKKKNDAKALRHCTHCKSTTHNARTCSDKKRKKSCNAESSVQDINSELPVDLGESSVRQNKKKCVEQPKDLCESSVAPKKKKCSELPKDLCESIVQKRNKCSVQLKERGANVSTPTHIDVTSATGQFTPMYGFQHMIPMLHPVMQQMHVPSGQHVPPAQHVTSVPHVPPLYQLYGMNVGANSTSCYGLLQQVMKSADGKQ* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2611 932 PANTHER OS02G0262500 PROTEIN 89 756 - -
Tpr3g2611 932 MobiDBLite consensus disorder prediction 11 35 - -
Tpr3g2611 932 Pfam MULE transposase domain 319 413 IPR018289 -
Tpr3g2611 932 MobiDBLite consensus disorder prediction 47 61 - -
Tpr3g2611 932 SMART 26again6 605 632 IPR006564 GO:0008270
Tpr3g2611 932 ProSiteProfiles Zinc finger SWIM-type profile. 594 630 IPR007527 GO:0008270
Tpr3g2611 932 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 756 IPR031052 GO:0006355
Tpr3g2611 932 MobiDBLite consensus disorder prediction 1 61 - -
Tpr3g2611 932 Pfam FAR1 DNA-binding domain 102 196 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2611 Tpr-Chr3 25574955 25578315 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr3g2611 FAR1 1.5e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2611 - - ccaj:109792835 880.167