Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2605 ATGGAATTCGTCGGAAAAACCGTTCGGAAAGAGGTGAACGGAGTTGGAATTCTCACCGGAACTGTCAAATCTTACGATTCGTCGTCGGGTTTGTTGGAGATCCTTTTCGAAGGCGGTCATTGTGAGGAGATGGAAGTTTCTGAGGTTGCTTCGCTGCTGGAAATTCAACCGGAGCTTACTGAGGTCAAAGTTCAGGTCGGTCGGAAACCTAAAAAACGACGCCGTGTTGAGCTGAGTGGCGAAACGACGTCGAGTTCAGGTAATGTTAGTGATGATTTGGTGGCGGGTAGTGAATTTAGCGGGATTTTGAATGGTGATGATTCTAGTGGCGGGAATGATGGGGATGTTGTGGGTAATGTAAATGGGACTAGTGGGAGTTTGGAGAAACTAGGAAATGGAAATGGGTTTGGTTTAGGAGAAATTTTGAATTTGAATGAAAATGAGGGTGTTTCTGATAATAATGATGATGATAATAGTAATGGAATTTGTGTTAAAGATGGTATTGATTTGAATGCTAGGCTTAATTTAAATGAGGATATTAATCTGAATGATGTGTGTGATTCCGATTTACCGCCTTTTAATAACGCGGGTAGTGTGGAGAGAAGAGATTGTATTGATTTGAATTTGGATGTGAGTGTTGAGGAGGGCGTGAACTTGGATGTGAATTCGGGAGGTGAAATTTTGCGGCGGGAATTTGATTTGAATGTGGGTGTGTGTGAAGAGGTTAAGGAAGCTCAGGGTTGTGCCGGTGGAAATGGATATTCCGAGGTAGATGGTGAGATGGGGCAGATTCGAGAAGAAGAGTCAGATGTTAAGCACATATATATGGAAGCTGATGGTGGTTGTGGTAATTTGAATTGTGCCTCTGATGGTATCAAATTGGAGGAACTTAATGTTTCGGCTGGGAATGTAGCTGAAGAAGGTTTGATCGAGGAAAAGGAAGGTCATGATGGCAAAGAAAATGTGGCGGCTATTGACTCTCTTCGGGTTTCGGATGCTGTTTCTGTTATGGATTGTGATTATGTTTCTTCTGAAGCTGCTGTTGCCGTAGTTAATCAATACCAAGATGATCCAGCAAGTCCGCGCAAACAAGGAATTAGTCAAAGGAAGAGAAGAAAAGTGTCAGATAATCTAAAATCCACCCCGGACACGGCTTTGAGGAGGAGTTCTCGCCGGACATCAGCAAGAAATCAGGTTTCAAGTGAAGTATCAGGGAAGGGGACTGATGATCCTTTGTCATCCTTGGAAACCAGTGTAACAGAAGAAAAACCTTCGATGCCTGGAAATGAGAAATATGAACAGTGCAATGTTCCTATACCGAAGCTGCAATTACCCCCTTCTTCTCAAAATTTGAATTTAGATGGCATTCCTGTCATTGAATTTTTTTCTGTTTATTCTTGTTTAAGATCATTCAGTACCTTGTTATTTTTGAGTCCGTTTGAGTTGGAAGATCTTGTAGCTGCACTTAAGTCTGAAATCCCTAGTGTATTATTTGACAGCATTCATGTTTCTATTTTGCAAACTCTGAAAATGCATTTGGAATTCCTTTCCAGTGAGGGTTGCCAATCTGCATCCATTTGCCTGAGGAATCTTAACTGGGATTTCTTGGACCTTGTCACATGGCCCATGTTCATGGCCGAGTACCTTCTGATTCACAGTTCACAGTTCAAAACTAGTTTTGATGCTAACCACTCAATGTTCGAAACTGACTACTACAAACAACCTGTCACTTTGAAGCTTGAGATTCTTCAGTACCTGTGCGATGATATGATTGAAGCAGACACCATAAGGTCAGAACTTAACAGAAGATCTTTGGTAACAGAGTCTGGTATGGATTTTGATCAGAATATTTATTTCGACACTTGCAAGAAAAAAAGAGCTGTCACAGATCTTTCTGGTGGATCTTGCTTGACTGAGGAGATTGTGGATGACACAACTGACTTGAACAGTGATGAATGTTGCCTCTGCAAGATGGACGGAAATTTAATATGCTGTGATGGTTGCCCTGCTGCATTCCACTCTAGGTGTGTCGGGCTTGCAAGTGACAGTCTGCCTGAAGGTGACTGGTATTGTCCCGAGTGTGCTATTGGAACACATCGGGCTTCGAGGAAATCACGAAGGTCACTCCGAGGAGCAGACTTGTTGGGGACGGATCCTCACGGCTGTCTTTATTTTGATAGCTGTGGTTACCTGTTAGTTTCAAACTCATCAGATGCAGGATCCTTGTTCAAGTACTACCATAGAAATGATATATCCGTTGTAGTTGAAGTTCTAAAGTCTATGGAGACTTTATATGGAGACTTATTAATGGCTATCTACAAGCATTGGGATATTCCGGCTGACTTAAATGCAGGGGCTAGTAATTTGGCATTCTTCAATCAAAGTTCCCGCAAGAACATGCAAAAAACAGCTGAATATTATGCTATGCCTACATCTGTAGCACCTTTTACTTCTTCAGAAACGTTTATTGACAAGAATCTGGTTGATGATCAGAAAAAGTTGGAGAAAAATTCAACTATTGACTGTTGTAGTCATGATGGCCAAGAGTTTCCAAAAACTGGGAACCAATTAGACTCAACAATAGAAAGTCCTTGTATTGCCTCAGAAGGATCAGCTGATACCGCACAAATCATAGGTGTTAGCAATACCCCCTATACGGGCAATAAGGATTCATCACAAGCCCCATGTGGGACCGACTACATAAACTATTATAGCTTTGCCAGGGTGGCCTCATTAGTTGCACAGGAGTTGTTGATATGCAAGTCACAAGAAAAGATCAATAAAAATATTGTAATGACTGAAGAAGAAATAATTTCAGACCAAACAAAGTCCATCATGAAGAAGTCCACCGACTTTTGTTGGCCAAGTATTCAAATCCTGAGCGCAGCTGCCCAAAAGGAAAAATGTGGGTGGTGCTTTTCTTGCAAGGTTGCAAATGATGACAGAGATTGCTTGTACATTTCTTTGGTGAAACCTCTTTATGAAGTGTCTAAAAGTGCTTCAGCTAGGCTTCAACCCATGAATATCCAGAATGGACATCTTAGAGAGATAATATGTCTTATTTTCTCTCTTGAGGTTCGATTGCGGGGTCTTTTATTGGGTCCATGGTTGAATCTGCATCAAACAGATCTTTGGCATAATAATCTTTTGAAGTCATCTGATCTTCTTCCTGTTAAACGATTATTGCTTCTTTTGGAGTCCAATTTGAGTGATCGTGCACTTTCAGCCGATTGGTTAAAGCATGTAGATTCTGTAGTTACTATGGGATCTGCTTCCCATATTGTGGTCAGTTCATCACGCGCATCCTCAAGGCAGGGCATTGGAAAGAAAAGAGCCAGGCAATCAGATATTGAATCCAGTTCATCTTCAAAGACTACTGGTGGTTTGGGAATGTATTGGTGGAGAGGTGGTAGGCTTTCGCGAAAGTTGTTTAATTGCAAGGTCCTGCCTCGCTCCTTTGTTACCAAGGCTGCTAGACAAGCTGGGTCTACAAAGATACCGGGTATTTTATATCCTGAAAATTCAGACTTTGTAAAGAGAAGCAGATGTGTTGCCTGGCGAGCTGCTGTTGAGATGTCAACAAGTGTTGAGCAGCTGGCTTTACAGGTTAGAGAACTCTATTCAAACATAAAGTGGCATGATATTGAGAATAACCATCCTCTATATGTATTAGACAAGGAATCTAAAAAATCAGCCAGGCTATTCAAAAAAGCAATTGTACGCAGGAAGTGCACGGATGGACAATCTGCGAAATACCTTCTTGATTTTGGGAAGAGAAGGGCTATTCCGGATATTATTATTAAACACGGTTCTTTTTTGGAGGAACCCTCAAGTGAGAGGAAAAAATATTGGCTGAACGAGTCTTATGTTCCTTTGCATCTTTTAAAGAATTTTGAGGAAAAAAGAATCGTCCGCCAGTCCAATGATAAGAAAAATGGAAAAATTCTTGAGCTTGATAGTGTAAAGAGGGATCCTCAACAAAGGGGTTTTTCATATTTGTTTTCCAGAATGGAAAGATCTGATTGTCATCTGTGTGGGCATTGCAAAAAAGATGTTCCAATAAGGGAAGCTGTGAGTTGCCTTTATTGCAAAGGATATTTCCACAAGAGGCATATCAGGAAATCTAGTGGCACAAGAGCTACAGAATGCACATATTCATGTCACAGATGCCAGAGTGGGTTGCATGTAAAGGCTAATACTAATAGTACGAAAGTTGGCTCAAAACGGCAGAAGATTCAACCACAGAATTGTAAAAGTGCTCCTTTGGTTTGTAAATCAGTGAACCTTAAAGGCAATAAAAAGGCAGCAAGCAAGGTGCGGCAGGTGGTATCTCGAAACAATAAGAAGATCCAATCAATTGTACCTCTTCGTCGTTCTACTAGGAAAGCCAAATCCTTGTATTTGCGCACTCAAATAATGGGAGGACGTAAAAAAGGAACACAAGGTAAAAAGAATGTAGGGCGTAAAAAAGGAAAGCAAAGTAAATCCAAGAAGGTGACATCTCAAAAGCCCAAGGAAACTACTGGTCAACTTAAGAAGTTTCCCGTTGCTACATCACATAAGAAAAGAATGCAACCTTCTAACAGTTACTGGCTTAATGGTCTTAAGTTTTCTAGAAAGCCAAATGATGAACGAGTAATGCTTTTTAAAGAGAAAAAGCATATTATCTCAGATGTTCTTACTGGTTCCTTTGATTGTCCTAAATGCTGCCTTTGTTGTGGAGATGGATCCACTTCAAATTATATTGCTTGTGAAATCTGTGGAGATTGGTTTCATGGGGATGCTTTTGGTCTCACTGTAGAGAATGCCGAACAACTTATTGGGTTTAGGTGCCATGTTTGTCGTAGTAGGGATGCTCCGATCTGTCCCCATGTGAAGATTAATGCATTGTCTGACACTGAGCCCAATGCTGCAATTGAGTGTGCCGAGGAATGA 4935 0.4107 MEFVGKTVRKEVNGVGILTGTVKSYDSSSGLLEILFEGGHCEEMEVSEVASLLEIQPELTEVKVQVGRKPKKRRRVELSGETTSSSGNVSDDLVAGSEFSGILNGDDSSGGNDGDVVGNVNGTSGSLEKLGNGNGFGLGEILNLNENEGVSDNNDDDNSNGICVKDGIDLNARLNLNEDINLNDVCDSDLPPFNNAGSVERRDCIDLNLDVSVEEGVNLDVNSGGEILRREFDLNVGVCEEVKEAQGCAGGNGYSEVDGEMGQIREEESDVKHIYMEADGGCGNLNCASDGIKLEELNVSAGNVAEEGLIEEKEGHDGKENVAAIDSLRVSDAVSVMDCDYVSSEAAVAVVNQYQDDPASPRKQGISQRKRRKVSDNLKSTPDTALRRSSRRTSARNQVSSEVSGKGTDDPLSSLETSVTEEKPSMPGNEKYEQCNVPIPKLQLPPSSQNLNLDGIPVIEFFSVYSCLRSFSTLLFLSPFELEDLVAALKSEIPSVLFDSIHVSILQTLKMHLEFLSSEGCQSASICLRNLNWDFLDLVTWPMFMAEYLLIHSSQFKTSFDANHSMFETDYYKQPVTLKLEILQYLCDDMIEADTIRSELNRRSLVTESGMDFDQNIYFDTCKKKRAVTDLSGGSCLTEEIVDDTTDLNSDECCLCKMDGNLICCDGCPAAFHSRCVGLASDSLPEGDWYCPECAIGTHRASRKSRRSLRGADLLGTDPHGCLYFDSCGYLLVSNSSDAGSLFKYYHRNDISVVVEVLKSMETLYGDLLMAIYKHWDIPADLNAGASNLAFFNQSSRKNMQKTAEYYAMPTSVAPFTSSETFIDKNLVDDQKKLEKNSTIDCCSHDGQEFPKTGNQLDSTIESPCIASEGSADTAQIIGVSNTPYTGNKDSSQAPCGTDYINYYSFARVASLVAQELLICKSQEKINKNIVMTEEEIISDQTKSIMKKSTDFCWPSIQILSAAAQKEKCGWCFSCKVANDDRDCLYISLVKPLYEVSKSASARLQPMNIQNGHLREIICLIFSLEVRLRGLLLGPWLNLHQTDLWHNNLLKSSDLLPVKRLLLLLESNLSDRALSADWLKHVDSVVTMGSASHIVVSSSRASSRQGIGKKRARQSDIESSSSSKTTGGLGMYWWRGGRLSRKLFNCKVLPRSFVTKAARQAGSTKIPGILYPENSDFVKRSRCVAWRAAVEMSTSVEQLALQVRELYSNIKWHDIENNHPLYVLDKESKKSARLFKKAIVRRKCTDGQSAKYLLDFGKRRAIPDIIIKHGSFLEEPSSERKKYWLNESYVPLHLLKNFEEKRIVRQSNDKKNGKILELDSVKRDPQQRGFSYLFSRMERSDCHLCGHCKKDVPIREAVSCLYCKGYFHKRHIRKSSGTRATECTYSCHRCQSGLHVKANTNSTKVGSKRQKIQPQNCKSAPLVCKSVNLKGNKKAASKVRQVVSRNNKKIQSIVPLRRSTRKAKSLYLRTQIMGGRKKGTQGKKNVGRKKGKQSKSKKVTSQKPKETTGQLKKFPVATSHKKRMQPSNSYWLNGLKFSRKPNDERVMLFKEKKHIISDVLTGSFDCPKCCLCCGDGSTSNYIACEICGDWFHGDAFGLTVENAEQLIGFRCHVCRSRDAPICPHVKINALSDTEPNAAIECAEE* 1645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2605 1644 SMART testlast3 455 515 IPR018501 -
Tpr3g2605 1644 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 644 712 IPR013083 -
Tpr3g2605 1644 SUPERFAMILY FYVE/PHD zinc finger 1565 1617 IPR011011 -
Tpr3g2605 1644 Pfam PHD-finger 653 695 IPR019787 -
Tpr3g2605 1644 SMART PHD_3 652 695 IPR001965 -
Tpr3g2605 1644 SMART PHD_3 1569 1615 IPR001965 -
Tpr3g2605 1644 MobiDBLite consensus disorder prediction 1472 1510 - -
Tpr3g2605 1644 ProSiteProfiles DDT domain profile. 455 515 IPR018501 -
Tpr3g2605 1644 MobiDBLite consensus disorder prediction 355 428 - -
Tpr3g2605 1644 MobiDBLite consensus disorder prediction 66 91 - -
Tpr3g2605 1644 MobiDBLite consensus disorder prediction 1481 1498 - -
Tpr3g2605 1644 Pfam DDT domain 460 509 IPR018501 -
Tpr3g2605 1644 PANTHER PHD-FINGER AND DNA BINDING DOMAIN-CONTAINING PROTEIN 1 1630 - -
Tpr3g2605 1644 CDD PHD1_AIRE 652 694 - -
Tpr3g2605 1644 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1562 1621 IPR013083 -
Tpr3g2605 1644 PANTHER PHD FINGER FAMILY PROTEIN 1 1630 - -
Tpr3g2605 1644 SUPERFAMILY FYVE/PHD zinc finger 647 704 IPR011011 -
Tpr3g2605 1644 ProSiteProfiles Zinc finger PHD-type profile. 650 697 IPR019787 -
Tpr3g2605 1644 MobiDBLite consensus disorder prediction 391 424 - -
Tpr3g2605 1644 ProSitePatterns Zinc finger PHD-type signature. 653 694 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2605 Tpr-Chr3 25472568 25484270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2605 1 1638 PHD Transcription Factor Family AT5G12400 40.832 0.0 1085
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Tpr3g2605 DDT 6.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2605 - - mtr:MTR_4g076180 2389.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2605 3 25472568 25484270 Tpr3g2605 3 25472568 25484270 ECH