Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2594 ATGCTTCAAAGCTTGGTCCCTCGTCCACCTCTCACTTCCAAACCTAATAATAATAATATGAATGCCAAACGCGCCGAACGTGAACATGACGACGATGATTCCACCCTTCAGGAACAACCATCTTTCAAAAGACCTAACTACTCCGCCGAGCACACGGCGGCGGAAGCCGAAGAACACGAGGAAGCACAGGCCTTCGAACCTGAAAACGAAGGTGAATCAACAGGTTTGAAACTCCTAGGGCTTTTGCTTCAATGCGCTGAGTGCGTTGCCATGGATAACCTCGATTTCGCTAACGACTTGTTACCGGAGATTACCGAGCTTTCCTCACCGTTTGGAACTTCGCCGGAGCGCGTCGGAGCTTATTTTGCACAGGCGTTACAAGCGCGTGTGGTGAGTTCTTGTCTCGGTAGTTACTCGCCGTTAACTGCTAAATCGGTAACCCTAACTCAGTCGCAAAGAATCTTCAACGCGTTTCAATCCTACAACTCAGTTTCACCGTTGGTGAAATTTTCTCATTTTACCGCTAATCAAGCAATTTTCCAAGCTGTGGACGGTGAGGATCGTATCCACATCATCGACCTCGATATCATGCAAGGACTTCAATGGCCAGGATTGTTTCACATCCTCGCTTCACGATCCAAGAAAATTCGTTCTGTTAGAATCACCGGTTTCGGATCTTCTTCAGAGCTTCTAGAATCAACGGGAAGAAGACTCGCCGATTTCGCGAGTTCACTCGGCCTTCCGTTCGAGTTTCATCCAATTGAAGGCAAAATCGGAAGCGTAACGGAACCGAGTCAACTCGGTGTTAGACCAAACGAAGCAATCGTTGTTCACTGGATGCATCATTGTTTATACGATATAACCGGAAGTGATTTAGGAACGTTGAGATTGCTGAGTCAGCTTCGGCCAAAACTAATCACCACCGTTGAACAGGATCTTAGCCACGCTGGTAGCTTCCTCGCGAGGTTTGTGGAAGCTTTGCATTATTACAGCGCGTTGTTCGACGCGCTTGGGGGTGGATTAGGTGTGGACAGTGTTGAGAGGCATATGGTGGAGCAGCAACTGTTGGGGTGTGAGATAAGGAACATTATTGCCGTTGGTGGGCCAAAGAGGACTGGCGAAGTGAAAGTTGAGAGATGGGGAGATGAATTGAAACGGGTCGGATTTCGACCCGTTTCACTTCGGGGTAACCCGGCTGCACAAGCCAGTTTATTGTTGGGGATGTTTCCTTGGAGAGGGTATACTTTGGTGGAAGAGAATGGTTCTCTCAAGCTTGGTTGGAAGGATCTTTCACTGTTAATTGCTTCTGCTTGGCAGCCGTCGGATTTGATGACTTATACTGATTGA 1347 0.4803 MLQSLVPRPPLTSKPNNNNMNAKRAEREHDDDDSTLQEQPSFKRPNYSAEHTAAEAEEHEEAQAFEPENEGESTGLKLLGLLLQCAECVAMDNLDFANDLLPEITELSSPFGTSPERVGAYFAQALQARVVSSCLGSYSPLTAKSVTLTQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQAVDGEDRIHIIDLDIMQGLQWPGLFHILASRSKKIRSVRITGFGSSSELLESTGRRLADFASSLGLPFEFHPIEGKIGSVTEPSQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLSQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGGGLGVDSVERHMVEQQLLGCEIRNIIAVGGPKRTGEVKVERWGDELKRVGFRPVSLRGNPAAQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLIASAWQPSDLMTYTD* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2594 448 PANTHER SCARECROW-LIKE PROTEIN 23 45 440 - -
Tpr3g2594 448 MobiDBLite consensus disorder prediction 1 20 - -
Tpr3g2594 448 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 440 IPR005202 -
Tpr3g2594 448 Pfam GRAS domain family 80 439 IPR005202 -
Tpr3g2594 448 MobiDBLite consensus disorder prediction 1 70 - -
Tpr3g2594 448 ProSiteProfiles GRAS family profile. 69 439 IPR005202 -
Tpr3g2594 448 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2594 Tpr-Chr3 25125167 25127333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2594 68 442 GRAS Transcription Factor Family AT5G41920 70.789 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr3g2594 GRAS 6.4e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2594 - - gmx:100816249 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2594 3 25125167 25127333 Tpr3g2594 3 25125167 25127333 ECH