Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2586 ATGCACTATGTTAAGCAAAAAAAATCGAGTTTAAGAGTTTATCCTTTTGTCCTATCCAATCCAATCCAATTGAAACTAAGAATTGGATATGGTTCCTTATCTAGTGAATACTCCATATCCCATTTCACTCTTTCACTGCCACATGTTCAACAACACACAATTATGGAAGCTCTTTTCCTTACCAAACCAATTTCTCACTTCAAACCCAAACACCACTCTCTAACTCCAAAACATCATCCATTACTCTCCCATCAATCTCTTCCCATCATCCGCCACAAACCCACCATCACCACCGCACTTCAAAACCAACAACAACAACAAACATCGCCCAAAGACATCATCGAAGATGAATCCTACGGCGAAGTCAAAAAAATCATCGGAAGCAAAGCTCTCGAAGATTCCACCGGAATGGAATATCTCATCGAATGGAAAGACGGCCATGAACCCTCCTGGGTACCGGCGGACTTCATAGCCAAAGACGTCGTTTCCGAATACGAAACTCCATGGTGGACCGCCGCAAGAAAATCCGACGAAAACGCCCTCAAAACAATCCTCGAAGCCGACGATAACCGCGACGTGAACGCCGTGGACTCCGACGGAAGAACCGCATTACTCTTCGTAGCAGGACTCGGCTCAGAGCCGTGTGTTAAACTTTTAGCAGAAGCCGGCGCGAATCTTGATCATCAAGATAACAGTGGCGGCTTATCAGCACTACACATGGCAGCCGGGTACATAAGACCCGGCGTGGCGAAGTTGCTTCTAGAACTCGGCGCGGATCCAGAAATCACAGATGACCGTGGAAAAACAGCGTTGGATTTAGCTAGAGAGTTATTAAAAGCTACGCCGAAAGGGAATCCAATGCAATTTGGGAGAAGAATTGGTTTAGAAGGGGTTGTTAGGGTTTTGGAAGAGGCGGTTTTCGAGTATGTTGAGGTGGAAGAGATTATGGAAAAGAGAGGGAAAGGTGAGAATTTGGAGTATTTGGTGAAATGGAAAGATGAAAGTGCTAATGAGTGGGTGAAGGCAAGGTATGTGGCGGAGGATTTGGTGAAGGATTATGAAGCTGGTCTTGAATACGCGGTGGCGGTGGTTGGTCGGAGAACTGGGGATGATGGGAAATACGAATGTTTAGTTAAATGGGTTGATTTGGAAGAGCCTACTTGGGAGCCTGAGGAGAATGTTGATTCTGAGCTTGTTAAGGTGTTTGAATTGAGTAATAATAATCAAGCCCAGCCCAAGCCCAGTGTTGATAGTGGGCTTTCTACTGTTGCTTTTAGTCAGGATGGCCCAACTAGTGTTAGCACATGA 1308 0.4557 MHYVKQKKSSLRVYPFVLSNPIQLKLRIGYGSLSSEYSISHFTLSLPHVQQHTIMEALFLTKPISHFKPKHHSLTPKHHPLLSHQSLPIIRHKPTITTALQNQQQQQTSPKDIIEDESYGEVKKIIGSKALEDSTGMEYLIEWKDGHEPSWVPADFIAKDVVSEYETPWWTAARKSDENALKTILEADDNRDVNAVDSDGRTALLFVAGLGSEPCVKLLAEAGANLDHQDNSGGLSALHMAAGYIRPGVAKLLLELGADPEITDDRGKTALDLARELLKATPKGNPMQFGRRIGLEGVVRVLEEAVFEYVEVEEIMEKRGKGENLEYLVKWKDESANEWVKARYVAEDLVKDYEAGLEYAVAVVGRRTGDDGKYECLVKWVDLEEPTWEPEENVDSELVKVFELSNNNQAQPKPSVDSGLSTVAFSQDGPTSVST* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2586 435 Gene3D - 116 163 - -
Tpr3g2586 435 Gene3D - 306 355 - -
Tpr3g2586 435 SMART ANK_2a 164 195 IPR002110 GO:0005515
Tpr3g2586 435 SMART ANK_2a 199 228 IPR002110 GO:0005515
Tpr3g2586 435 SMART ANK_2a 233 262 IPR002110 GO:0005515
Tpr3g2586 435 ProSiteProfiles Ankyrin repeat profile. 199 231 IPR002110 GO:0005515
Tpr3g2586 435 ProSiteProfiles Chromo and chromo shadow domain profile. 310 339 IPR000953 -
Tpr3g2586 435 ProSiteProfiles Ankyrin repeat profile. 233 265 IPR002110 GO:0005515
Tpr3g2586 435 SUPERFAMILY Chromo domain-like 115 169 IPR016197 -
Tpr3g2586 435 PANTHER HOMEOBOX PROTEIN WARIAI 55 410 - -
Tpr3g2586 435 SMART chromo_7 308 358 IPR000953 -
Tpr3g2586 435 SMART chromo_7 359 407 IPR000953 -
Tpr3g2586 435 SMART chromo_7 118 170 IPR000953 -
Tpr3g2586 435 Gene3D - 356 404 - -
Tpr3g2586 435 ProSiteProfiles Chromo and chromo shadow domain profile. 344 416 IPR000953 -
Tpr3g2586 435 SUPERFAMILY Chromo domain-like 308 355 IPR016197 -
Tpr3g2586 435 SUPERFAMILY Ankyrin repeat 164 276 IPR036770 -
Tpr3g2586 435 Gene3D - 164 305 IPR036770 -
Tpr3g2586 435 PANTHER SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC 55 410 IPR030300 GO:0009416|GO:0009507|GO:0045038|GO:0080085
Tpr3g2586 435 SUPERFAMILY Chromo domain-like 363 402 IPR016197 -
Tpr3g2586 435 Pfam Ankyrin repeats (many copies) 219 274 IPR002110 GO:0005515
Tpr3g2586 435 MobiDBLite consensus disorder prediction 410 435 - -
Tpr3g2586 435 CDD CD3_cpSRP43_like 357 404 - -
Tpr3g2586 435 ProSiteProfiles Ankyrin repeat region circular profile. 233 265 - -
Tpr3g2586 435 ProSiteProfiles Ankyrin repeat region circular profile. 199 231 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2586 194 274 CAMTA Transcription Factor Family AT5G09410 41.379 8.82e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2586 K12271 - gmx:100818382 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2586 3 24996676 24998346 Tpr3g2586 3 24996676 24998346 ECH