Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2580 ATGAATTTCATTCCTAGTATTCTATTTATTCTCTCTCTTATAGTTTCCAATTCCATAGCATCATCCATTATTACTCAATCTCAATCCTTCAGTGATGGAGAGATCATTGTTTCATCAAAAGGATTGTTTGAGTTTGGTTTCTTCAGTATTAAAGATCCTAATAAACGCTACGTCTGTATTCGATTCAAGAATATTTCAACTCAAAATGTTGTTTGGGTTGCAAATGATGGCAAGCCAATCAATGACTATTCTGCAGTTTTGAAACTAAATAGTTCTGGCAGTTTGGTCCTTACACACAACAACAATGTTGTTTGGTTCACAAATTCTTCCACAAAAGCACAGAAACCGGTGGCACAACTCTTGGATAATGGTAATCTAGTCATAAAAGAAGATAGTGTTAGTAAAACCTATCTGTGGCAAAGCTTTGACTACCCATCTAATACATTGTTGGCAGATATGAAGTTGGGATGGGACCTTAAAAGAAATTTGAGTAAGTGTCTTAAAGCATGGAAGAGTGATGATGATCCAACACCAGGAAACTTTACTTGGTGTGTGGTATTGAATCCGTATCCTGATATCTATATGATGAAGGGAGAAAAAAAGTACCACAGACTTGGACCATGGAACGGCTTGCGTTTTAGCGGTATGCCAGAGATGAAGCCTAATCCTGTTTTCAGCTACAAGTTTGTCTACAACAAAGAAGAGGTTTATTACTCATGGAGCTTCAATGATAGTTCTCTAATATCAACAGTGGTACTTAACCAAACAAGTTACCAACGTCCACGCTATGTATGGTCAAAAGCCGAGGAATCATGGATGCTTTATTCAAGAATGCCAGGAGATTATTGTGACCTTTATAGTCTATGTGGAGTCAATGGATATTGCAGCAGTACTAATTCACCAATATGTGAATGTTTAAATGGGTTCAAGCCTAATTTTCCTGAAAAATGGAACTCAATGGACTGGTCTGATGGATGTGTCAGAAATCACCAATTGAACTGCATCAATGAAGGGTTTGTCTCAGTACCAAACTTGAAAATTCCAGATACTAAAAATACTTCGGTGGATCATGACGAGAGTATTGGTCTAGAGCAATGTAGAGCCAAATGCTTGAAAATTTGTTCATGCATGGCTTATACAAATACAAATATAAGTGGAGCAGGAAGTGGTTGTGTTATGTGGTTTGGTGATTTAATTGATATCAAATTTATTCCACTTGGTGGCCAAGTTCTATATATCAGGATGCCTGCTTCAGAATTAGACGATGAGCACAGGAGGAACTTGAGAAAAAAAGTTCTAATTGTTGTTTTTGCGGCTTTGGGAATGCTTTTACTTGCGATATATTTTTTCTACAGATTCCGGAGGAGGAGCGTTGTTGGGACGTCAAAGAGTGAAGGTGACTATGAAAGACACGAGAACGATATGGATCTCCCCTTACTAAATTTGTCAACAATTATTATTGCCACCGATAACTTCTCAGAGAAGAACAAGATTGGAGAAGGTGGTTTTGGAGCTGTCTATTTGGGAAAATTAGGAAGTGGGCTAGAAATTGCTGTCAAGAGACTTTCACAGAGCTCAAAACAAGGGATGAGAGAATTCATAAATGAAGTAAAACTTATTGCAAATGTTCAGCACCGAAATCTTGTAAAGCTTATTGGCTGTTGCATTCAGAGACATGAAAAATTGCTAGTTTATGAATACATGTCTAATGGCAGCCTAGATTACTTCATTTTTGATCATACCAGAAGTCAATTGCTAGATTGGCCAAAGCGCTTCCACATAATTTGTGGAATCGCCAGAGGGCTTATGTATCTTCATCAAGATTCTCGATTGAGGATTATTCATAGAGATCTCAAAACAAGTAATGTTTTACTAGATGATACTATGAATCCCAAAATATCAGATTTTGGAATGGCTAGAACTTTTGGAGGAAACCAAATTGAAGGAAACACAAATATAATTGTTGGGACATATGGGTACATGGCACCAGAGTATGCTATTGACGGACAATTTTCCGTGAAATCTGATGTTTTCAGCTTTGGTGTTTTGATATTAGAGATTATATGTGGGAAGAAAAACCGAGTGCGTTATCGTGCAAAGCAAACTCTTAACCTTGTTGCTTATGCATGGACATTCTGGAAACATGAAAGAGCTTTACAAATAATTGACTCAAACATAGAGGATTCAAGCATTGTATCGGAAGTATCACGTTGCATACACGTTGCACTTTTATGTGTGCAACAATACCCAGAGGATAGGCCTACCATGGCTGATGTGATTCTAATGTTAGGGAGTGAGATGTCATTGGAGCCAGGTTTTATTAAGAGGAGGGAATCTATTGAAGCAAATTCAAGCTCAAGTAGGAAGGATATAAGTTCAAACTATGAATTGACCATAACCTCTTTAAGTGTTCGATGA 2418 0.3743 MNFIPSILFILSLIVSNSIASSIITQSQSFSDGEIIVSSKGLFEFGFFSIKDPNKRYVCIRFKNISTQNVVWVANDGKPINDYSAVLKLNSSGSLVLTHNNNVVWFTNSSTKAQKPVAQLLDNGNLVIKEDSVSKTYLWQSFDYPSNTLLADMKLGWDLKRNLSKCLKAWKSDDDPTPGNFTWCVVLNPYPDIYMMKGEKKYHRLGPWNGLRFSGMPEMKPNPVFSYKFVYNKEEVYYSWSFNDSSLISTVVLNQTSYQRPRYVWSKAEESWMLYSRMPGDYCDLYSLCGVNGYCSSTNSPICECLNGFKPNFPEKWNSMDWSDGCVRNHQLNCINEGFVSVPNLKIPDTKNTSVDHDESIGLEQCRAKCLKICSCMAYTNTNISGAGSGCVMWFGDLIDIKFIPLGGQVLYIRMPASELDDEHRRNLRKKVLIVVFAALGMLLLAIYFFYRFRRRSVVGTSKSEGDYERHENDMDLPLLNLSTIIIATDNFSEKNKIGEGGFGAVYLGKLGSGLEIAVKRLSQSSKQGMREFINEVKLIANVQHRNLVKLIGCCIQRHEKLLVYEYMSNGSLDYFIFDHTRSQLLDWPKRFHIICGIARGLMYLHQDSRLRIIHRDLKTSNVLLDDTMNPKISDFGMARTFGGNQIEGNTNIIVGTYGYMAPEYAIDGQFSVKSDVFSFGVLILEIICGKKNRVRYRAKQTLNLVAYAWTFWKHERALQIIDSNIEDSSIVSEVSRCIHVALLCVQQYPEDRPTMADVILMLGSEMSLEPGFIKRRESIEANSSSSRKDISSNYELTITSLSVR* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2580 805 SUPERFAMILY Protein kinase-like (PK-like) 474 763 IPR011009 -
Tpr3g2580 805 SMART ntp_6 334 415 IPR003609 -
Tpr3g2580 805 CDD STKc_IRAK 498 763 - -
Tpr3g2580 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 176 IPR036426 -
Tpr3g2580 805 Pfam D-mannose binding lectin 70 171 IPR001480 -
Tpr3g2580 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Tpr3g2580 805 PIRSF SRK 1 805 IPR024171 GO:0004674
Tpr3g2580 805 ProSiteProfiles PAN/Apple domain profile. 334 417 IPR003609 -
Tpr3g2580 805 CDD PAN_AP_plant 330 416 - -
Tpr3g2580 805 ProSiteProfiles EGF-like domain profile. 279 315 IPR000742 -
Tpr3g2580 805 Pfam S-locus glycoprotein domain 204 312 IPR000858 GO:0048544
Tpr3g2580 805 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 30 803 - -
Tpr3g2580 805 Gene3D Transferase(Phosphotransferase) domain 1 568 776 - -
Tpr3g2580 805 SMART serkin_6 492 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2580 805 SMART blect_4 27 145 IPR001480 -
Tpr3g2580 805 CDD B_lectin 27 145 IPR001480 -
Tpr3g2580 805 Pfam Protein tyrosine and serine/threonine kinase 495 761 IPR001245 GO:0004672|GO:0006468
Tpr3g2580 805 ProSiteProfiles Protein kinase domain profile. 492 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2580 805 ProSiteProfiles Bulb-type lectin domain profile. 21 141 IPR001480 -
Tpr3g2580 805 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 30 803 - -
Tpr3g2580 805 Gene3D - 16 142 IPR036426 -
Tpr3g2580 805 Gene3D Phosphorylase Kinase; domain 1 457 567 - -
Tpr3g2580 805 Pfam PAN-like domain 336 401 IPR003609 -
Tpr3g2580 805 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2580 Tpr-Chr3 24939439 24944007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2580 432 790 Receptor kinase-like Gene Family AT4G23190 50.954 9.32e-122 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr3g2580 PK_Tyr_Ser-Thr 7.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2580 - - mtr:MTR_4g081750 1060.83