Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2569 ATGTTTCTGCGGCCAGAGTCTGAAGTTGAACCAATGGATTGTACACCTGCTAGAAAGACACAAAAGGCTGACCGAGAAAAGTTAAGGAGGGATCGACTCAATGAACAGTTTGTAGAACTGGGTAACATTTTAGACCCTGATAGGCCCAAAAACGATAAAGCAACCATTCTAGGCGATACAGTTCAATTGCTGAAGGACCTTACTTCTCAAGTTAGTAAACTAAAAGATGAATATACTATGCTAAATGAAGAGTCTCGTGAGTTGTCTCAGGAGAAAAATGATCTCAGAGAAGAAAAAGCTTCTCTTAAATCAGATATCGAGAATTTGAATAACCAGTATCAGCTTCAACTAAGGACTATGTATCCATGGCCTGCAATGGATCATTCCGTTATGATGGCTCCACCATCATATCCGTATCCAGTCCCAATGCCAGTACCTCCTGGTTCAATTCCCATGCAGCCGTACCCCTACTATGCTAATCAACATCCTGCAGTCATCCCTAACCCGTGTTCAACATATGTTCCTTTTTTAGCCCCGAATACAATTGTGGAACAACAATCCACTCAGTACATATCCCCGCCTCTTCATCCAGGTAGCCGGTCCCATGTATCAGGAAAACAAGACTCCAAAAACAAATCATCGAGGGAGAGCAAGGCTCAAAGAAATGAGGATTCCAATGATGTAGCAACGGACCTTGAGTTGAAGACTCCCGGGTCTTCTGCAGAACAGAATTTATCATCCGCACAAAAAAAATCTAGTAAGTCGTCAAGGAAGGAAAACAGTTTCACAGAAGGTAGTTCATTAGGCAAGTGTTCTTCATCTCACAGTGTTCAGGATAGCTCATCAAGTAGTGTAGTTGGGGGAAGAAAGTCTACTGAATGA 882 0.424 MFLRPESEVEPMDCTPARKTQKADREKLRRDRLNEQFVELGNILDPDRPKNDKATILGDTVQLLKDLTSQVSKLKDEYTMLNEESRELSQEKNDLREEKASLKSDIENLNNQYQLQLRTMYPWPAMDHSVMMAPPSYPYPVPMPVPPGSIPMQPYPYYANQHPAVIPNPCSTYVPFLAPNTIVEQQSTQYISPPLHPGSRSHVSGKQDSKNKSSRESKAQRNEDSNDVATDLELKTPGSSAEQNLSSAQKKSSKSSRKENSFTEGSSLGKCSSSHSVQDSSSSSVVGGRKSTE* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2569 293 MobiDBLite consensus disorder prediction 190 293 - -
Tpr3g2569 293 MobiDBLite consensus disorder prediction 1 30 - -
Tpr3g2569 293 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 17 67 IPR011598 GO:0046983
Tpr3g2569 293 MobiDBLite consensus disorder prediction 203 230 - -
Tpr3g2569 293 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 87 IPR036638 GO:0046983
Tpr3g2569 293 MobiDBLite consensus disorder prediction 259 293 - -
Tpr3g2569 293 SMART finulus 23 73 IPR011598 GO:0046983
Tpr3g2569 293 PANTHER TRANSCRIPTION FACTOR BHLH121 6 291 IPR044579 GO:0003700|GO:0055072
Tpr3g2569 293 Coils Coil 64 119 - -
Tpr3g2569 293 Gene3D - 17 100 IPR036638 GO:0046983
Tpr3g2569 293 Pfam Helix-loop-helix DNA-binding domain 18 67 IPR011598 GO:0046983
Tpr3g2569 293 MobiDBLite consensus disorder prediction 11 30 - -
Tpr3g2569 293 PANTHER TRANSCRIPTION FACTOR BHLH121 6 291 - -
Tpr3g2569 293 MobiDBLite consensus disorder prediction 232 251 - -
Tpr3g2569 293 CDD bHLH_AtILR3_like 22 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2569 Tpr-Chr3 24867467 24870896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2569 7 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 61.433 5.03e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr3g2569 HLH 3.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2569 - - cam:101491902 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2569 3 24867467 24870896 Tpr3g2569 3 24867467 24870896 ECH