Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2552 ATGGAATTTGAATCCGAGGTAGCAACTTATGATTTTTATAATGAGTATAGCAAGAAAATGGGGTTCAGAATTCGCCGCGAATATGGGAATAAAAGCAAAATTGATGGAGTTCTAACTTCCAGAAGATTCACATGCTTCAAAGAGGGTAATCGAGGTGTTGACAAGCGAGATTACTTGACAAAAGAGCCTAGAGCAGAAACAAGAACTGGATGTCAAGCACGCATGGTTATTTCGCTTGATCGGAAGATTGGAAAATACAAGGTTGTTGACTTTGTTGCTCAACACAATCACATGCTTCAACCAAATGAGTATGTTCATATGTTGCAATGTCATCCTCTACTTAAGTAG 348 0.3851 MEFESEVATYDFYNEYSKKMGFRIRREYGNKSKIDGVLTSRRFTCFKEGNRGVDKRDYLTKEPRAETRTGCQARMVISLDRKIGKYKVVDFVAQHNHMLQPNEYVHMLQCHPLLK* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2552 115 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 1 108 - -
Tpr3g2552 115 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 108 - -
Tpr3g2552 115 Pfam FAR1 DNA-binding domain 11 101 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2552 Tpr-Chr3 24691128 24691475 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr3g2552 FAR1 1.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2552 - - cam:101500125 184.496