Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2550 ATGGGTTGGCCTTATCTAGGAGAGACCCTCAAACTCTACACTCAAAACCCAAACACCTTCTTCTCCAAAAGACACAAAAGGTATGGAAATATATTCAAGACTAGGATACTTGGTTATCCATGTGTGATGATTTCAAGCCCAGAGGCAACCAAAAGTGTGCTTGTGACACATGCACATTTGTTCAAGCCAACATACCCTGCAAGTAAAGAGAAGTTAATAGGACCAGAGGCTGTTTTCTTTCAGCACTTAGGTGACTATCACTCCATGCTTAAGAAACTTGTTCAGTCCACTTTTATGCCCTCTGCTATTAAAAATTCAGTCTTTGATGAGGTTGAACAAATTGTCCTTAAACTACTCCCAACTTGGTCTAATACAACCATCATTGCCTTACAAGAAATGAAAAGGTATGCTTTTGAGGTAGCTGCCATTTCAGCCTTTGGTGAAATAATGGAGATTGAATTTAAACAAATCAAAGATCTATATAGGAACTTGGAGAAGGGCTATAACTCATATCCTCTATATGTTCCTGGAACTTCTTATTGGAAATCAATCAAGGCAAGGAAGCTTTTGAATGAAACTATAAGGAGATTAATACATAAAAGAAGGGATAACAATGATTATGGAGGTGGATTGTTGGGAGTTTTGTTGAAAGCTAGAGGTGACAGAATAAAGAAGCTCACTGATTCTCAGATTATCGATAATCTCATTGGAGTTATATTTGCAGCACATGATACTACTGCTAGTGTTCTAACATGGGTTCTAAAGTATTTGCATGACAATGTCAATCTCTTGGAAGCTGTCACGGAAGAGCATGAAGGGATTAAAAATAAATTAGTTATGGAAAATCGTGGGCTTACATGGGATGATACAAGGCAGATGCCACTCTCTGGCAGGGTTATCCAAGAAACTTTAAGGAGTGCAAGCATACTGTCATTCACCTTCAGAGAAGCTGTACAAGACGTTGAGCTCGAAGGTTACAACATTCCTAAAGGTTGGAAGGTCCTTCCCCTCTTCAGAACCATTCATCACTCTGCAGATTTCTTCCCTCAACCAGAAACGTTTGATCCTTCCAGATTCGAGGTAGCACCGAAACCAAACACGTTTCTGCCATTTGGAAACGGAGTCCACTCTTGTCCAGGAAGTGAGCTCGCTAAGCTTGAGATGCTCATCCTCCTCCACCACTTAACGCTTTCCTACAGGTGGCAAGTTGTGGAAAATGGAGATGGAATACAGTATAGTCCTTTTCCTGTGCCCAAACATGGACTGCTAATCAATATAATCCCAAGGAACAAAATACCTACCTGA 1305 0.4038 MGWPYLGETLKLYTQNPNTFFSKRHKRYGNIFKTRILGYPCVMISSPEATKSVLVTHAHLFKPTYPASKEKLIGPEAVFFQHLGDYHSMLKKLVQSTFMPSAIKNSVFDEVEQIVLKLLPTWSNTTIIALQEMKRYAFEVAAISAFGEIMEIEFKQIKDLYRNLEKGYNSYPLYVPGTSYWKSIKARKLLNETIRRLIHKRRDNNDYGGGLLGVLLKARGDRIKKLTDSQIIDNLIGVIFAAHDTTASVLTWVLKYLHDNVNLLEAVTEEHEGIKNKLVMENRGLTWDDTRQMPLSGRVIQETLRSASILSFTFREAVQDVELEGYNIPKGWKVLPLFRTIHHSADFFPQPETFDPSRFEVAPKPNTFLPFGNGVHSCPGSELAKLEMLILLHHLTLSYRWQVVENGDGIQYSPFPVPKHGLLINIIPRNKIPT* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2550 434 PRINTS P450 superfamily signature 241 258 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2550 434 PRINTS P450 superfamily signature 298 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2550 434 PRINTS P450 superfamily signature 369 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2550 434 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2550 434 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 371 380 IPR017972 GO:0005506|GO:0016705
Tpr3g2550 434 PRINTS E-class P450 group I signature 25 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2550 434 PRINTS E-class P450 group I signature 230 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2550 434 PRINTS E-class P450 group I signature 250 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2550 434 PRINTS E-class P450 group I signature 297 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2550 434 PRINTS E-class P450 group I signature 337 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2550 434 PRINTS E-class P450 group I signature 368 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2550 434 PRINTS E-class P450 group I signature 378 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2550 434 SUPERFAMILY Cytochrome P450 2 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2550 434 PANTHER CYTOCHROME P450 26 1 427 - -
Tpr3g2550 434 Gene3D Cytochrome P450 1 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2550 434 Pfam Cytochrome P450 3 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2550 434 PANTHER ABSCISIC ACID 8'-HYDROXYLASE 2 1 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2550 Tpr-Chr3 24683559 24686430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2550 1 422 Cytochrome P450 AT3G19270 58.962 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2550 K09843 - gmx:100782541 692.575