Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2541 ATGGCTACTACTAGAATTATCACTAGTTTTGTTGTCATATTCGTGCTCCTAGGCACAATATGTGATGCACAATTGTCATCTACGTTTTATGATAGTACATGCCCTAATGCACTTAGCACAATTAGAACAGCCATTCGAACTGCGATTTCGAAAGAGCGTCGTATGGCTGCATCTCTCATTCGCCTTCATTTTCACGATTGTTTTGTTAAGGGGTGTGATGCATCAATTTTATTGGATGATAGTTCCACAATCGAGAGCGAAAAGAGTGCACGTCCGAATATTAACTCGGTAAGGGGATTTGAAATCATTGATAAAGCAAAATCTGAGGTGGAGAAAGTATGTTCCGGAATTGTGTCTTGTGCAGACATTGTAGCCATAGCAGCACGTGATGCATCATTCGCCGTTGGTGGTCCTTCATGGACAGTTAAACTTGGACGAAGAGACTCTACCACCGCAAGCAAAACTTTGGCCAATACTGACCTTCCATTATTTACAGACGATCTTAAAACTCTTATATCTCATTTTACAAAAAAAAATCTCACTCCTAGAGACATGGTTACTCTATCTGGTGCGCATACTATTGGACAAGCTCAGTGTTTCACATTTCGTGGCAGGATATACAACAATGCAAGTGACATAGATGCTGGATTTGCTAGCACTCGTCAACGTGGTTGTCCATCGTCTAGCACTACCGCAAACGATCAAAAGTTGGCAGCATTGGATTTGGTTACACCAAATTCTTTTGACAACAACTACTTTAAGAATTTAATTCAAAAGAAGGGTCTTCTTCAATCCGATCAAGTTTTGTTTAGCGGAGGATCTACTGATTCTATTGTTTCAGAATACAGCAAAAATCCTACAACTTTTAAGTCAGACTTTGCAGCTGCTATGATAAAGATGGGAGATATTGAACCCTTAACTGGATCGGCTGGAGTCATAAGGAGCATATGCAGTGTTGTCAACTAG 966 0.4027 MATTRIITSFVVIFVLLGTICDAQLSSTFYDSTCPNALSTIRTAIRTAISKERRMAASLIRLHFHDCFVKGCDASILLDDSSTIESEKSARPNINSVRGFEIIDKAKSEVEKVCSGIVSCADIVAIAARDASFAVGGPSWTVKLGRRDSTTASKTLANTDLPLFTDDLKTLISHFTKKNLTPRDMVTLSGAHTIGQAQCFTFRGRIYNNASDIDAGFASTRQRGCPSSSTTANDQKLAALDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFSGGSTDSIVSEYSKNPTTFKSDFAAAMIKMGDIEPLTGSAGVIRSICSVVN* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2541 321 PANTHER PEROXIDASE 72-RELATED 6 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 Gene3D - 28 321 - -
Tpr3g2541 321 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Tpr3g2541 321 Gene3D Peroxidase, domain 2 162 300 - -
Tpr3g2541 321 Pfam Peroxidase 42 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 ProSiteProfiles Plant heme peroxidase family profile. 24 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 PANTHER PEROXIDASE 6 319 - -
Tpr3g2541 321 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 SUPERFAMILY Heme-dependent peroxidases 24 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr3g2541 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Tpr3g2541 321 CDD secretory_peroxidase 24 320 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2541 Tpr-Chr3 24593959 24595668 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2541 5 321 Peroxidase AT1G14550 69.876 3.81e-161 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2541 K00430 - gmx:100811641 543.117