LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr3g2536	ATGGCTAATAGAATTATCACTAGTTTTGTTGTCACATTGGTGGTGTTAGCCACAATATGTGATGCACAATTGTCATCTACATTTTATGACGGTACATGTCCTAATGCACTTAGCACTATTAGAACTGCGATTCGTACTGTAGTTTCTAAAGAGCGTCGTATGGCTGCATCTCTTATTCGTCTTCATTTTCATGATTGTTTTGTCCAGGGGTGTGATGCATCAATTTTGTTGGATGATAGTTCCACAATCGAGAGCGAAAAGAGTGCACTTCCAAATGTTAACTCAGTAAGGGGATTTGAAGTCATTGATAAAGCAAAATCTGAGGTGGAAAAAGTATGCCCAGGAGTTGTATCTTGTGCAGACATAGTAGCTATAGCAGCACGTGATGCATCATTTGCTGTTGGTGGTCCATCATGGACAGTGAAACTTGGACGTAGAGACTCTACCACCGCAAGCAAAAGTTTGGCCAATACAGACCTTCCATTATTTACAGACGATCTTAACACTCTTATATCTCGTTTTACAAACAAAGGTCTCACTGCTAGAGACATGGTTACTCTATCTGGCGCGCACACAATCGGACAAGCTCAATGTTTCACATTTCGTGGTAGGATATACAACAATGCAAGTGACATAGATGCTGGATTTGCTCGTACTCGCCAACGTGGTTGTCCATCTTTGAGTACGACCGCGAACAATCAAAAGTTGGCAGCATTGGACTTGGTCACACCAAATTCTTTTGACAATAACTACTTCAAGAATTTAATTCAAAAGAAGGGTCTTTTACAATCAGATCAAGTTTTATTCAGTGGAGGATCTACAGATTCTATCGTTTCAGAATACAGCAAAAATCCTACAACTTTTAAGTCTGACTTTGCCGCAGCTATGATAAAAATGGGAGATATTGCACCCTTAACTGGATCCGCCGGAATCATAAGAAGCATTTGCAGCGCTGCCAACTAA	963	0.405	MANRIITSFVVTLVVLATICDAQLSSTFYDGTCPNALSTIRTAIRTVVSKERRMAASLIRLHFHDCFVQGCDASILLDDSSTIESEKSALPNVNSVRGFEVIDKAKSEVEKVCPGVVSCADIVAIAARDASFAVGGPSWTVKLGRRDSTTASKSLANTDLPLFTDDLNTLISRFTNKGLTARDMVTLSGAHTIGQAQCFTFRGRIYNNASDIDAGFARTRQRGCPSLSTTANNQKLAALDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFSGGSTDSIVSEYSKNPTTFKSDFAAAMIKMGDIAPLTGSAGIIRSICSAAN*	321

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr3g2536	320	PANTHER	PEROXIDASE 72-RELATED	5	319	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Tpr3g2536	320	ProSiteProfiles	Plant heme peroxidase family profile.	23	320	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Tpr3g2536	320	ProSitePatterns	Peroxidases active site signature.	55	66	IPR019794	GO:0004601
	Tpr3g2536	320	SUPERFAMILY	Heme-dependent peroxidases	23	320	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Tpr3g2536	320	PANTHER	PEROXIDASE	5	319	-	-
	Tpr3g2536	320	Gene3D	Peroxidase, domain 2	161	299	-	-
	Tpr3g2536	320	PRINTS	Haem peroxidase superfamily signature	55	69	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Tpr3g2536	320	PRINTS	Haem peroxidase superfamily signature	117	134	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Tpr3g2536	320	PRINTS	Haem peroxidase superfamily signature	135	147	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Tpr3g2536	320	PRINTS	Haem peroxidase superfamily signature	183	198	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr3g2536	Tpr-Chr3	24548210	24549612	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr3g2536	9	320	Peroxidase	AT1G14550	69.108	2.90e-160	448

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr3g2536	K00430		-	gmx:100811641	548.51

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