Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2535 ATGTTTAATCAAATTTTAGAATTTCCGGGACTTTTTAATAGCTCTAAACATGTCTGTCAAATAATCTTTCAAAAATATGTCTGTGAAATTTCCTCTTCGACTGGATCATTCAGTGAGATAGAAACACTTGGAAGTGATACTAGAGGAGTATACTACAGAGGAAAGCTTAGTAATGGAAGCCAAGTAGCTGTGAAAAGATTCTCAACTGAATTTTTCAGCACACATAGATCCGATAAGAAGCGATTGTTGAAAGAAATGAAAGTCACTAGTCATGTTGGTCACCCGAATTTGCTTCATATAAGGGGACGGTGTCAAGACAACAATGAAATCATTACAGTCTATGATTTTGTCCCTAATGGAAGCCTCGACAAATGGCTATTCGGAGCTGGTGTTCTTCCGTGGACGCGTCGGTTCAAAGTCATCGAAGATGTAGCTGATGGCTTGAGTTTCTTGCACAGTAAACAACTAGCTCACAAGAACATGAAATGCAGCAGTGTTTTTCTAGATGTCAGCTTCAGAGCTGTTTTGGGAGATTTTGGATTTGTGCTATTGGGAGCAGAATCAAAACAGTTTGAGGCAGTAGTGTGTAATGGTGCTGATGTGTTTGAGTTTGGTGTGGTTGTGTTGGAAGTGATTGGTGGAAGGCCAAGGGTGGAGGAAACAGATCAAGGAAATTCGGAAGAGAGGAACTTATTGGATTTTGCATGGAACTTGCATGAGACTGATGAGAAAGTGAAGCTGGTTGATAGAAGAATAGGATCGTTGATCAATTTGGAGCAAGCGATTCGAGTTATGGAAATAGGGTTGCTTTGTACTTTAAATGAGAACAAAGGAAGACCTTCGATGGAGCAAGTTGTAGAGCTTCTGCATAACATGGAGAAGCCTATTCCTGAGTTGCCAAGAACAAGACCAGTTACTTTGTTTCCTTATAAGTTTTAA 939 0.3983 MFNQILEFPGLFNSSKHVCQIIFQKYVCEISSSTGSFSEIETLGSDTRGVYYRGKLSNGSQVAVKRFSTEFFSTHRSDKKRLLKEMKVTSHVGHPNLLHIRGRCQDNNEIITVYDFVPNGSLDKWLFGAGVLPWTRRFKVIEDVADGLSFLHSKQLAHKNMKCSSVFLDVSFRAVLGDFGFVLLGAESKQFEAVVCNGADVFEFGVVVLEVIGGRPRVEETDQGNSEERNLLDFAWNLHETDEKVKLVDRRIGSLINLEQAIRVMEIGLLCTLNENKGRPSMEQVVELLHNMEKPIPELPRTRPVTLFPYKF* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2535 312 ProSiteProfiles Protein kinase domain profile. 37 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2535 312 PANTHER - 27 306 - -
Tpr3g2535 312 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 27 306 - -
Tpr3g2535 312 Gene3D Phosphorylase Kinase; domain 1 12 116 - -
Tpr3g2535 312 Gene3D Transferase(Phosphotransferase) domain 1 117 194 - -
Tpr3g2535 312 Pfam Protein tyrosine and serine/threonine kinase 40 182 IPR001245 GO:0004672|GO:0006468
Tpr3g2535 312 SUPERFAMILY Protein kinase-like (PK-like) 23 289 IPR011009 -
Tpr3g2535 312 Gene3D Transferase(Phosphotransferase) domain 1 195 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2535 Tpr-Chr3 24544703 24545641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2535 29 308 Receptor kinase-like Gene Family AT3G53380 33.876 5.59e-45 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr3g2535 PK_Tyr_Ser-Thr 1.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2535 - - gmx:100781464 475.322