Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr3g2530 | ATGTACTGGAGGAGAATACAGTGCAGAGATCGGAGATGGGCTTTGTTGTTGCAGCCATCAAAATACTTCCTTAGGCCAAAGACCACCGCGAAAGAATATTCTTCACACGGTGGTATTATTAGAAGAGATGTTTTAGGTTCAGGTTCATCTAGTCATGTTTCATCTGGACATAGTTTTACTGGTCTGAACAGAAGGCCTAGTTTTTGTCTTAGGAGTACTCAGATACACGCTTTTAGTTCTAAAAGTGATGGAAGTAATGCAAGTGAGAATAAACAAGTACATGTTAATGTCGGAGCTAATTTTGATAAGAATCAGATAGATAAGTCCAGGGAAGATGTTAAATGCAGCAATGCTCATGCACGACTTGGAGAACAGGATCAAGAGGAGTGGCTTAAGAATGAGAAGCTTGCTGTAGAAAGTAAAAGGAAAGAATCACCGTTTCTGACTAGAAAAGACAAGTTTAAAAATGAATTTTTGAGAAGAATTGTTCCGTGGGAGAAAATAAACATTTCATGGGATACATTTCCTTATCACATACCTGAGCATACGAAAAATCTTCTGACGGAATGTGCTGCTTCCCATTTGAGACATAATAAGTTATCTTGTTTTGGCTCTCGCCTTGCATCTTCAAGTGGAAGAATATTGCTTCAGAGCATTCCCGGCACCGAGCTCTATCGCGAGAGAGTAGTTAGAGCGCTTGCACAAGATTTACAAGTTCCATTGTTGGTGCTTGACAGCAGCATCCTTGCTCCTTATGATCTTGACGATGATCAATCATCAGACTATGAGTCGGATGATTCGGAATCTGGGGAAGAAGGTGCTCTAGAGTCAGAGAATGAGGATGATAATGATGCTAGTAATGAAGAAGAGTGGAGTAGCAGTACTGAAGCGAAGTCAGATGCAAGTGATAATGAAGATGCACTAGCATCTGCTGAAGCAGCCCTTAAGAGAGTTAAGGCCGCTGTTCAGAAACTTGTCCCTTATAATGTTGAAGAACTTGAGAAGATGGTGACTGGTGGAGATGACAGTTCTGAGTCATCGAGTTCTAATGATGCGAAGTCTTCTGATAAATCAGAAAGTCAGCTAAGAAAAGGTGACCGTGTGAAGTACACTGGGCCTTCTATTGAACTTACAGACGATGATAGGGATGTATTTTTAAATAATGGTCAGAGAGGAGAGGTATACGAGGTTAATGGAGATCGAGTTGCCGTCATCTTGGATATTAACGAAGAGAAGGCTAATGATAGTGAGGTTGAAAACCTTAACAACGATCGTAAAAAACCATCAGTTTATTGGATAAATGTTAAGGACATCGAGAATGATCGTGATGCTCAATCACAGGATTGCTATATAGCAATGGAGGCTTTATGTGAGGTTTTGAATTCCAAACAACCTCTTATAGTCTATTTTCCAGATAGTTCACAGTGGTTGCATAAATCAGTTCCTAAGTCAAGCCGGAATGAGTTCTTTAACAAGGTTGAGGAGATTTTTGACCGGTTATCTGGTCCAGTAGTATTGATTTGCGGGCAAAGCAAAGTTCAATCAGGATCAAAGGAGAAAGAAAAATTAACGATGATACTTCCAAACTTCGGACGTGTTACTAAGCTGCCTCTTTCTTTGAAGCACATGACTGATGGATTCAAAGAGGGAAAGATATCAGAAGATGATGAAATTAACAAACTCTTCTCGAATGTTTTTAGTGTACATCCACCTAAGGAGGAGAATCTACAGACAGTATTCAAAAAACAACTCGAGGAAGACAGGAAAATTGTGATTTCACGTAGTAATCTGAATGAACTACGAAAGGTTCTTGAAGAAAATCATCTATCATGCATCGACCTCTTGCATGTGAATACCGATGGCATCATTTTAACAAAACAAAAAGCTGAAAAAGTAGTAGGCTGGGCAAAAAATCATCACTTATCATCATGCTTGCATCCTTCTATTAAAGGAGAAAAATTGTTCATACCTCGCGAAAGTCTTGAAATTGCAATCTCAAGGATGAAAGACATGGAAACTATGTCAAGAAAACCTTCTCAGAACCTCAAGAACCTTGCAAAGGATGAGTTCGAGAGCAATTTCATTTCATCGGTTGTAGCTCCTGGTGAAATAGGTGTACAGTTTGATGACATAGGTGCTCTTGAAGATGTTAAGAAGGCACTTCAGGAACTTGTTATTCTTCCAATGAGAAGGCCCGAGCTTTTCTCTCACGGAAACCTGTTGCGGCCCTGCAAAGGAATATTACTCTTTGGTCCTCCTGGAACCGGGAAAACCCTTCTGGCCAAGGCACTTGCGACAGAAGCTGGTGCAAATTTTATCAGCATAACTGGTTCGACCCTTACGTCAAAGTGGTTTGGAGATGCTGAGAAACTAACCAAAGCGCTTTTCTCATTTGCCAGCAAGCTTGCACCTGTCATTATATTTGTTGATGAAGTTGACAGTTTGCTTGGTGCTAGAGGTGGTGCTTTTGAGCATGAGGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCGTGGGATGGATTGAGGTCAAAAGAAAATCAGAGAATCCTCATTCTTGGAGCAACAAACCGGCCATTTGACCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATGTTGATTTACCAGATGCTGAAAATCGAAAGAAGATTCTAAGAATATTTCTTGCAAAAGAAAATCTGAATTCTGATTTTCAGTATGACAAACTTGCTAACTTGACCGAAGGCTACTCTGGAAGTGATTTGAAGAACCTCTGTGTTGCTGCAGCATATCGACCGGTTCAAGAGCTCTTAGAAGAAGAAAAGAAGAGAGACGATGGTACTACAACTTCAGTATTAAGGCCTCTTAATTTGGATGATTTTGTACAAGCAAAATCCAAGGTGGGTCCATCTGTTGCGTATGATGCAACAAGCATGAATGAGCTAAGGAAGTGGAATGAAATGTACGGTGAAGGCGGTAGTAGAACCAAATCACCATTTGGATTCGGGAACCGATCTTGA | 3009 | 0.4048 | MYWRRIQCRDRRWALLLQPSKYFLRPKTTAKEYSSHGGIIRRDVLGSGSSSHVSSGHSFTGLNRRPSFCLRSTQIHAFSSKSDGSNASENKQVHVNVGANFDKNQIDKSREDVKCSNAHARLGEQDQEEWLKNEKLAVESKRKESPFLTRKDKFKNEFLRRIVPWEKINISWDTFPYHIPEHTKNLLTECAASHLRHNKLSCFGSRLASSSGRILLQSIPGTELYRERVVRALAQDLQVPLLVLDSSILAPYDLDDDQSSDYESDDSESGEEGALESENEDDNDASNEEEWSSSTEAKSDASDNEDALASAEAALKRVKAAVQKLVPYNVEELEKMVTGGDDSSESSSSNDAKSSDKSESQLRKGDRVKYTGPSIELTDDDRDVFLNNGQRGEVYEVNGDRVAVILDINEEKANDSEVENLNNDRKKPSVYWINVKDIENDRDAQSQDCYIAMEALCEVLNSKQPLIVYFPDSSQWLHKSVPKSSRNEFFNKVEEIFDRLSGPVVLICGQSKVQSGSKEKEKLTMILPNFGRVTKLPLSLKHMTDGFKEGKISEDDEINKLFSNVFSVHPPKEENLQTVFKKQLEEDRKIVISRSNLNELRKVLEENHLSCIDLLHVNTDGIILTKQKAEKVVGWAKNHHLSSCLHPSIKGEKLFIPRESLEIAISRMKDMETMSRKPSQNLKNLAKDEFESNFISSVVAPGEIGVQFDDIGALEDVKKALQELVILPMRRPELFSHGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRKKILRIFLAKENLNSDFQYDKLANLTEGYSGSDLKNLCVAAAYRPVQELLEEEKKRDDGTTTSVLRPLNLDDFVQAKSKVGPSVAYDATSMNELRKWNEMYGEGGSRTKSPFGFGNRS* | 1003 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr3g2530 | 1002 | ProSitePatterns | AAA-protein family signature. | 850 | 869 | IPR003960 | GO:0005524|GO:0016887 | |
Tpr3g2530 | 1002 | Gene3D | - | 879 | 964 | - | - | |
Tpr3g2530 | 1002 | MobiDBLite | consensus disorder prediction | 356 | 373 | - | - | |
Tpr3g2530 | 1002 | MobiDBLite | consensus disorder prediction | 291 | 305 | - | - | |
Tpr3g2530 | 1002 | Gene3D | - | 706 | 982 | IPR027417 | - | |
Tpr3g2530 | 1002 | SMART | AAA_5 | 743 | 880 | IPR003593 | - | |
Tpr3g2530 | 1002 | MobiDBLite | consensus disorder prediction | 340 | 355 | - | - | |
Tpr3g2530 | 1002 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 707 | 968 | IPR027417 | - | |
Tpr3g2530 | 1002 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 1 | 998 | - | - | |
Tpr3g2530 | 1002 | MobiDBLite | consensus disorder prediction | 254 | 306 | - | - | |
Tpr3g2530 | 1002 | PANTHER | P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN | 1 | 998 | - | - | |
Tpr3g2530 | 1002 | Pfam | AAA+ lid domain | 900 | 936 | IPR041569 | - | |
Tpr3g2530 | 1002 | Pfam | ATPase family associated with various cellular activities (AAA) | 747 | 877 | IPR003959 | GO:0005524|GO:0016887 | |
Tpr3g2530 | 1002 | MobiDBLite | consensus disorder prediction | 337 | 373 | - | - | |
Tpr3g2530 | 1002 | CDD | AAA | 712 | 878 | - | - | |
Tpr3g2530 | 1002 | MobiDBLite | consensus disorder prediction | 256 | 289 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr3g2530 | Tpr-Chr3 | 24484767 | 24503458 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr3g2530 | 706 | 938 | Calmodulin-binding Proteins | AT3G56690 | 38.983 | 4.96e-42 | 165 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr3g2530 | - | - | gmx:100812718 | 1562.74 |