Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2504 ATGGTAGTGATCATGCAAGAGCAACATCAACATCATCATCATCATCATAAACAGCAGCAGCAGCAGCAAAATCCCTCTGCACTGTCACCACAACTCACTACCAATCACCAATCCTCAACAACCGTCACCTCCCTTAGGTCACCGTCCTCCGTCACCACCTCCCTTTGTTCGCCTCTTCATATTGCTTCCCACCGCCAACCCTTACTTCCTGCGCCGGTCGCGGTGGTTCTCCCGTCCGGGGAGCCGGTTTCGACGGCGCCGGTGAATTTTCAGTTGACGAGAGTCCGCCTGTCGGACATTGGTCCTTATGACGGTGCACCGACGGGGACTTATGTTAGGGCAATGGAAACACTGTGTTCTTCTTTGTTGAAGTACAATGCGGCGTTGATTGAATTAGGGAGTGAAGATACTGCTTTGATGCGATGTGGATTGGAAGGTGCTAGATTGTTCTTTAGGAGTAGAGCACATCTCGGTGTTGGAAAGGGAAGCCGTGGGGTTTACATGTATAGGGCAGGAAGAGCTTTGGAGGATTGGGATTCGTCTCCTCCTTGTATGGCTGATATTTTTAGGTGCATGGGAAAGGCTTCTCGTGTTGCTTTGTCTGCTATTGCAAGGCATCTTCGCCTTAGAAGCGATGTTTTCAACCATCTGCTTGATGATGCTCCATTGCCTGCTAACGAGGTGTCTTCTTCTGTTCTTGTTGGGACCTATTCACATGCTTCTTTACAAAATGGAAAAGGTGCCATCGGAGGCGGTAAGCCTACCGTCAATGGTGAAGTTGAGAAGGGGTTGTTGACCTTGATATCTTCTGACACTCCCGGTCTTCAGGTTGTTCAAAGCAATGTGAACAAGGACCCGTCATTAAGAAGTGTTCTATCAGATCCTTTGTCTGGCTCATTTTTGGAAGATGCAATGCTTGTCTCATGTGGACATTCTTTTGGTGGTCTCACACTGAGGAGAGTCATTGAAACATCAAGATGCACCCTCTGCAATGTTGATATTGAGACCGGCTCTCTGATCCCTAATCTTGCTCTTAGAGCTGCAGCTGCTGCTGTCAAGCATGAGGATGATCGAAGGTTATTTCGTAATGCTGCTCTTCGAAAGCGGCGGAAAGAAATGGGTGAACCAATGGATCCAATCAGAAGAGTGAACAGGGAAAATGGAGATTTTACTTCTGTTGATGGACTCCAGCGGGGAGTACAATATCCATTTTCAGTAAATGAGAAAGTTATTATCAAGGGTAACAGGAGAACACCCGAAAAATTTGTTGGGAAAGAAGCTGTCATTACGTCGCAGTGTCTCAATGGCTGGTATTTGCTCAAGATTATTGGATCTGGAGAGAATGTCCGCCTGCAGTATCGTTCTCTCAGGAAGCTCTTAAACACACCAACAATGGAAGACCAGTGTCAGTTGCAGACAGTTCAAAATAGCAGCTCTTAG 1440 0.4708 MVVIMQEQHQHHHHHHKQQQQQQNPSALSPQLTTNHQSSTTVTSLRSPSSVTTSLCSPLHIASHRQPLLPAPVAVVLPSGEPVSTAPVNFQLTRVRLSDIGPYDGAPTGTYVRAMETLCSSLLKYNAALIELGSEDTALMRCGLEGARLFFRSRAHLGVGKGSRGVYMYRAGRALEDWDSSPPCMADIFRCMGKASRVALSAIARHLRLRSDVFNHLLDDAPLPANEVSSSVLVGTYSHASLQNGKGAIGGGKPTVNGEVEKGLLTLISSDTPGLQVVQSNVNKDPSLRSVLSDPLSGSFLEDAMLVSCGHSFGGLTLRRVIETSRCTLCNVDIETGSLIPNLALRAAAAAVKHEDDRRLFRNAALRKRRKEMGEPMDPIRRVNRENGDFTSVDGLQRGVQYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGSGENVRLQYRSLRKLLNTPTMEDQCQLQTVQNSSS* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2504 479 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 286 356 IPR013083 -
Tpr3g2504 479 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 86 281 - -
Tpr3g2504 479 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 284 477 - -
Tpr3g2504 479 MobiDBLite consensus disorder prediction 20 47 - -
Tpr3g2504 479 MobiDBLite consensus disorder prediction 1 47 - -
Tpr3g2504 479 SUPERFAMILY RING/U-box 288 354 - -
Tpr3g2504 479 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 284 477 - -
Tpr3g2504 479 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 86 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2504 Tpr-Chr3 24025639 24043531 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2504 288 466 Plant U-box Gene Family AT5G05230 41.436 1.44e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2504 - - gmx:100807199 379.793