Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2494 ATGGAGAAATTCTCATTCTCATTCTCATTTTCCTTTATCTTTTTCATCACATTTCTACTTTGTTTCTTCACTTGTCAACAAGTTAGATCACAAAGTGATGATGATTCACAATCACTTCTTTCACTTAAATCATCCATAGACATTCACAACAAACTTCCATGGCCGGCGAAGCAAAACGACGACGTTTGCACTTGGATTGGAGTTAAAGATTGTTTCAAAGGAAAAGTTAGAAAGCTAGTACTCGAATATTTCAACTTAACAGGAACATTAGATTCAAAAATCTTGAACCGTTTAGATCAACTTCGAGTTCTTAGTTTCAAAGGAAACTCACTTTCTGGTCAAATCCCTAATCTCTCGAATCTCGTCAATTTGAAATCTATTTATCTTAATGATAATAACTTCTCCGGTGAGTTTCCGGCTTCTGTTTCGGTTCTTCACCGTGTTAAGGTTATTAATCTGTCTGGTAATAGAATCTCCGGCGAGATTCCGGCGTCGTTGGTTAAGGTTCCTCGGCTGTATGTTCTCTACTTGGAAGATAACTTGTTTACTGGTTCGATTCCTGGTTTTAATCAAACCGGACTTAAGTACTTGAATGTCTCGAATAATAAACTCTCCGGCGAGATTCCGGTGACAACTGCATTGAACCGGTTTAATGTGTCGTCGTTTTCGGGGAATTTAGAGCTATGTGGAGAACAGATCCATAAAAAATGCAGAAGTAGCAATCTGTTTCCGCCATCGTTGGCGCCGTCACCGTCGGTTGGTTCCGTTGGAGGGAACACGAAAACGACGTCGTCGAAATCGAACCGTACAAAACTGATAAAGATAATTGGAGGGAGTGTTAGCGGGTTTGTTTTGTTGTTAATTTTGTTAATTATTCTTGTGTGGGTAATTCGCAAGAACCGTAGGAAAAGGGTTGGATCCTCTGCAGCAAGGAGAGGGAAGAGTGGTGACGTGGCAACAGGAGAAGGAGAAAATGATGGAGGAGGAGAGGGTAGAGGAAGTAATTATGAAGCAAAACAAGGAGGATTTGCTTGGGAAAATGAGGGTATAGGGAAATTGGTGTTCTGCGGAGCAGGGGATCGTGAAATGGGTTATAGCTTAGAGGATTTACTTAAGGCTTCTGCTGAGACATTAGGGAGGGGTATTATGGGAAGTACATATAAAGCAGTGATGGAATCAGGTTTTATTGTTACGGTTAAGAGGTTGAAAGATGCTAGGTACCCTGGATTAGAGGAGTTTAGGACACATATAGACTTACTTGGTAAGCTTAGACATCCTAATTTGGTCCCACTTAGGGCTTACTTTCAAGCTAAAGAAGAACGGCTTCTTGTCTATGATTATTTTCCCAATGGAAGCCTCTTCTCTCTTGTTCATGGATCAAAAACATCTAGCGGCGGAAAACCTCTTCACTGGACATCATGTCTTAAAATTGCAGAAGATCTAGCCACAGGCCTTCTCTATATCCACCAAAACCCTGGCATGACTCATGGAAACCTGAAATCTTCTAATGTGTTGCTTGGTGCCGACTTCGAGTCATGTCTCACCGATTACGGTCTCACTGTGTTCCTCAATCCTGACACGATGGAAGAACCAAGTGCCACTTCTTTTTTCTATAGAGCGCCCGAGTGCCGCAGTTTTCAGCGGCCACAAACTCAACCTGCAGATGTATACAGCTTTGGTGTCCTTCTCCTAGAGCTTTTGACGGGAAAAACACCCTATCAAGACCTTGTTCAGACACACGGTTCAGATATACCTAAATGGGTTCGGTCAGTGCGTGAAGAAGAAACCGAATCTGGTGACGATCCTGCCTCTTCAGGCAATGAAGCTTCTGAAGAGAAGCTTCAGGCTCTATTGAACATTGCAATGGCATGTGTTTCAGTTGCACCGGAGAATAGGCCTACAATGAGAGAAGTTCTAAAGATGATAAGAGATTCAAGAGGAGAAGCTCATGTCTCATCTAATAATAGTAGTGATCATTCACCCGGTAGATGGTCAGATACAGTTCAAAGCTTGCCAAGGGATGAACATCTTAGCATATAA 2040 0.4211 MEKFSFSFSFSFIFFITFLLCFFTCQQVRSQSDDDSQSLLSLKSSIDIHNKLPWPAKQNDDVCTWIGVKDCFKGKVRKLVLEYFNLTGTLDSKILNRLDQLRVLSFKGNSLSGQIPNLSNLVNLKSIYLNDNNFSGEFPASVSVLHRVKVINLSGNRISGEIPASLVKVPRLYVLYLEDNLFTGSIPGFNQTGLKYLNVSNNKLSGEIPVTTALNRFNVSSFSGNLELCGEQIHKKCRSSNLFPPSLAPSPSVGSVGGNTKTTSSKSNRTKLIKIIGGSVSGFVLLLILLIILVWVIRKNRRKRVGSSAARRGKSGDVATGEGENDGGGEGRGSNYEAKQGGFAWENEGIGKLVFCGAGDREMGYSLEDLLKASAETLGRGIMGSTYKAVMESGFIVTVKRLKDARYPGLEEFRTHIDLLGKLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLVHGSKTSSGGKPLHWTSCLKIAEDLATGLLYIHQNPGMTHGNLKSSNVLLGADFESCLTDYGLTVFLNPDTMEEPSATSFFYRAPECRSFQRPQTQPADVYSFGVLLLELLTGKTPYQDLVQTHGSDIPKWVRSVREEETESGDDPASSGNEASEEKLQALLNIAMACVSVAPENRPTMREVLKMIRDSRGEAHVSSNNSSDHSPGRWSDTVQSLPRDEHLSI* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2494 679 Pfam Protein kinase domain 375 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2494 679 SUPERFAMILY Protein kinase-like (PK-like) 376 650 IPR011009 -
Tpr3g2494 679 MobiDBLite consensus disorder prediction 648 679 - -
Tpr3g2494 679 Gene3D Ribonuclease Inhibitor 191 241 IPR032675 -
Tpr3g2494 679 ProSiteProfiles Protein kinase domain profile. 372 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2494 679 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 669 - -
Tpr3g2494 679 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 11 669 - -
Tpr3g2494 679 Pfam Leucine rich repeat N-terminal domain 33 68 IPR013210 -
Tpr3g2494 679 MobiDBLite consensus disorder prediction 646 679 - -
Tpr3g2494 679 Pfam Leucine rich repeat 123 181 IPR001611 GO:0005515
Tpr3g2494 679 Gene3D Ribonuclease Inhibitor 34 190 IPR032675 -
Tpr3g2494 679 Gene3D Phosphorylase Kinase; domain 1 358 447 - -
Tpr3g2494 679 MobiDBLite consensus disorder prediction 587 610 - -
Tpr3g2494 679 Gene3D Transferase(Phosphotransferase) domain 1 448 666 - -
Tpr3g2494 679 MobiDBLite consensus disorder prediction 306 333 - -
Tpr3g2494 679 SUPERFAMILY L domain-like 33 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2494 Tpr-Chr3 23917028 23922226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2494 9 679 Receptor kinase-like Gene Family AT1G60630 61.209 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr3g2494 Pkinase 2.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2494 - - lja:Lj3g3v3500180.1 997.653