Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2492 ATGGCGGCTACTGTATCTGCTTGGTCGAAACCAGGTGCATGGGCACTTGATTCTGAGGAACACGAAGCTGAACTCCTTCAAAACAAAAACAACAACAACGTTGTTGAATCCAAACCACTCGCTGAATTCCCTTCTCTCGCTGTCGCCGCCGCAACAAAACCCAAAAAGAAGAAAGCCCAAACCCTATCTTTAGCCGAATTCACTGCAAAACCTGTTCCTTCATTCACTCATCAAGATCCGGTTGATCTTCCAACCGGTCCACGTCAGCGAACCGCTGAGGAACTCGAACGTGACCGTACTCGTGGGTTTGGATCTTACGGTGGTGGTCGTTCTAATCGGGGAGATGATGAATCTTCTGTTTCAAGATGGGGTTCTAATAGGGTTCCCAGAACCGATTCGTTTGGTTCTGATAGAAGAGATAGGGATTCCAATCGTGAACCTTCTAGGGCTGATGAAATTGATAATTGGGCTGCTGCTAAGAAACCTTCTTTTGGGAATGGGTCTGATAGAAGGGATAGAGGTGAAAGAGGTGGTAGTTTTTTTGATTCGCAATCGCGGGCTGATGAATCTGATAGCTGGGTTACTAATAAGACTTTTGCGCCGAGTGAGGGACGGAGATTTGGTGGTGGTGGTGCTGGCGCTGATAGAGAGAGGAGAGTAGGGTTTGGTACTAGTGGTGGTGCTGATTCAGATAATTGGAATAATAAGAAGAAAGTTGGTGAATTTAGTGTTGCAAGTGAAAGAACTGAGAATGTTGGTGGTGGAAGGCCAAGGCTTGTTTTGCAACCGCGTTCTGCGCCTCCGAGTAATGAAAATCAGGATGTTCCTACTGTTGCTGCTGTTGTAGCAAAGCCTAAGGGTGCAAATCCGTTTGGTGAGGCTAGGCCAAGGGAGCAGGTTTTGGCGGAGAAAGGACAGGATTGGAAGAAGATTGATGAGCAACTTGAGAGCATGAAGATTAAGGAGACAACAGTGGTTGAAGGGTTTGGTAAGAGGGGTTTTGGTTCTGGTAATGGACGCGGTGAAGATAGATCTGAGAGGAGTTGGAGGAAATCAACCCCAACCCCATCTGATGATGGTCGTTCCGAAAGTGCTGAGAAAGTGGAGGATGAACACATTGAAGAAAACTAA 1131 0.4686 MAATVSAWSKPGAWALDSEEHEAELLQNKNNNNVVESKPLAEFPSLAVAAATKPKKKKAQTLSLAEFTAKPVPSFTHQDPVDLPTGPRQRTAEELERDRTRGFGSYGGGRSNRGDDESSVSRWGSNRVPRTDSFGSDRRDRDSNREPSRADEIDNWAAAKKPSFGNGSDRRDRGERGGSFFDSQSRADESDSWVTNKTFAPSEGRRFGGGGAGADRERRVGFGTSGGADSDNWNNKKKVGEFSVASERTENVGGGRPRLVLQPRSAPPSNENQDVPTVAAVVAKPKGANPFGEARPREQVLAEKGQDWKKIDEQLESMKIKETTVVEGFGKRGFGSGNGRGEDRSERSWRKSTPTPSDDGRSESAEKVEDEHIEEN* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2492 376 Pfam Plant specific eukaryotic initiation factor 4B 7 322 IPR010433 GO:0003743
Tpr3g2492 376 MobiDBLite consensus disorder prediction 89 103 - -
Tpr3g2492 376 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 366 IPR010433 GO:0003743
Tpr3g2492 376 MobiDBLite consensus disorder prediction 165 179 - -
Tpr3g2492 376 MobiDBLite consensus disorder prediction 183 199 - -
Tpr3g2492 376 MobiDBLite consensus disorder prediction 326 376 - -
Tpr3g2492 376 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 1 366 - -
Tpr3g2492 376 MobiDBLite consensus disorder prediction 51 275 - -
Tpr3g2492 376 MobiDBLite consensus disorder prediction 112 131 - -
Tpr3g2492 376 MobiDBLite consensus disorder prediction 337 376 - -
Tpr3g2492 376 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2492 Tpr-Chr3 23895759 23898061 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2492 1 352 Eukaryotic Initiation Factors Gene Family AT4G38710 49.620 1.71e-69 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2492 - - pvu:PHAVU_011G033300g 422.55