Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2487 ATGGCAGATAGCGTGGTTTCATTTCTTTTGGAACACTTATCCCAATTGCTGCAACGCAAAGCTAATTTGCTTTGTGGCGTGGAAGACAAAATCATATCCCTCCGCAATGAACTCGAAATCATAAATGTCTACCTCAAAACTTCCCCTCAAGGGAAGAACAACAACAACAAACAGATTGAACAGAAGGTTCTGAGTCAGATCAGAGATATCTCCTACGTAGCCGAGGATGTAATTGACACATTCATTGCCAATGTTTCCATCTACAAGGACAGAAACGTACTAGGAAGAATGATTCACAGCGTTGATCACGCAAAGTTACGCCACGACGTAGCAGAGAAGATTGACAAGATCAAAACAACACTCAATGAGATACATGAAAACAAGATCAAATACAATCAAGAAAGTACTGATCAATCAGCATCAGCAACAGAAGATGAGGAGAGGACCCGATCACTTCACAAATTAAGAAGAAATGTGGAGGAGGAAGATGTTGTAGGCTTTGTCCATGAATCTGAAGAAGTCATCAATAGACTCATAGAGGGTGGTTCGCCTCGTCTCAACGTTGTTTCAATCATTGGTATGGGTGGGCTGGGCAAAACAACTCTTGCCCGAAAGGTCTATAACAGTGAAAAAGTGAAGAAACACTTCAATAGCCGCACATGGATTTACGTTTCAAATGAGTGTAGAGTCCGAGAACTTTTGATGGGCATTCATCAAAATTTAATGTCAAACCATGCTTGTGAATGTAGAAGGAGCAGCAACAAAAGGAAGTGTAAGAAACACAATGAAGCTGTGAATAATTCTGATGATATCTCTAACTTAAGTGATGATGAGCTGAAGAAAAAAGTGTGGGAATGCTTGAAGTGGGAAAAATATTTGCTAGTTCTTGATGACTTGTGGAAAATACAAGATTGGGATGAGGTCAAGGATGCTTTTCCCGACGAAAACAGAGGAAGCAGAATACTGATAACTAGTCGTTTGAAAGAAGTTGCTTCGCATACCAGTCGAGATCCTCCTTATTGCCTTCAATTTCTGAATGAAGAACAGAGTTGGGAGCTCTTCTCCAAAAAAGTTTTTAGAGGAGAAGAGTACCATTGTGATGTTGGATCTCTAGGTAAGCAAATCGTTAAAAGTTGTGGCGGGTTGCCACTCTCAATTGTGGTGCTAGCAGGGCTTCTAGCAAACAAGGAAAAGTCACACAGAGAATGGTCCAAAGTGTTAGGACATGTCAATTGGTATCTTACCCGAGACGAGACCCAAGTTAAGGACGTAGTACTTAAACTCAGTTTCGACAACTTGCATTCAAAATTAAAACCATGTTTTTTATATCTAGGGATATTCCCTGAAGATTCTGAAATATATGTAAGGCAATTGTTGCACCTATGGGTCGCTGAAGGATTTATACAAGAAACAGGAAGTAGGGATCCAAATGACGTTGCTGAAGACTACTTGTACGAGCTCATTGATCGTAGTTTGATCCAAGTAGCACGAGTGAAGGATAGTGGAGGCGTGAAAACATGTCGCATCCATGATCTTCTCAGAGATCTTTGTATATTAGAGAGCAAAGAGGACAATCTCTTCCAAGTTTGCACAGATAACAACATTTTGATCCCCACAAAACCTCGCAGATTGTCTGTCCATTCTAGCATGTCTCACTATGTTTCTTCAAGCCCCAATGACCATTCATGTGTTCGTTCTTTGTTTTGCTCTGACCCGAACTGCTTCGTTTACAGCAATGACTGGAAATGGCTTTGCAAAGGCTTCAAATTGGTTCGTGTGTTGGATCTTTGGGGAAAGTATTGTTGTGAGATTCCTTCAAACTTGGGAAACTTTGTCCACTTGAGGTACTTGAGAATAGGCTCACAATGTATTAGAAGTGTTCCTGATTCTATCTGCAACCTTCAAAATCTACAAACATTAGATTTTCGATCTACGACCAGGACAACCACAATTTCTTTCCCCTATGGAATAACAAAGCTCAAGCATCTAAGACAATTGTATACTTTTCAGCCAATCATGCTACGTGGTCGTCGTTCAGACAGTGAAGTTATGTGGAATCTTCAAACCATATCTTCCATTGTACTTAATAAAGATACTACATATCTCATAGAGAAAGGAAGTTTCCCCAAACTAAGAAAATTAAGATTGCATATCTATTCAAACTTCAATCGCGATGTGCCCAAAATGTTGCTAAGTCTACAACATTTGAGGCATTTGAATAAGCTGGAAATCTACTTCGACACGTCAGATTGGTGCTCACGAAGGAAGATTAGTTATGAGTTCGAGGAAGTGTTACAAAGATTGAAGCAATATAAGCCCGAGAAAGTGTTACAAAGTTTGAAGCACTTGAGATATTTGAGAATACTAAAAATTACCAATGCCCTCGACCTTGTAACCTCTGTACCCATGTTTCCTCTCAACATTACCAAGTTAACATTGTCATGTATTACTTGCTTGAATGATGACGTGATGAAAGCTATTGGAAGTCTCACCCAACTCCAAATTTTGATCTTAACTGGAAAGAAATTTTGGCCTTCAGATTCATTTTCTGATCTTAATTGTGTTGAAGACGGGTTCCCAGAGTTGCAGGAGTTTCGGATGGAAGTTCTGCCCATCCAAAACTTGAAATTAGTCAATGGTTCGATGCCACGCCTTCAAATCCTCGTTATTCACAACTGTTATAAGTTGGATAGCCTCCCAAGTGAACTGTGGTCTTTGACTACCTTGAGAAAAGTTTGTGTTCGGAAACCCTCCAATGCAATGGCTGCAATGGTACAAAAGTTGGAAGTTAATAATGGATGTGAGGTCATTGTAGAATAA 2820 0.3986 MADSVVSFLLEHLSQLLQRKANLLCGVEDKIISLRNELEIINVYLKTSPQGKNNNNKQIEQKVLSQIRDISYVAEDVIDTFIANVSIYKDRNVLGRMIHSVDHAKLRHDVAEKIDKIKTTLNEIHENKIKYNQESTDQSASATEDEERTRSLHKLRRNVEEEDVVGFVHESEEVINRLIEGGSPRLNVVSIIGMGGLGKTTLARKVYNSEKVKKHFNSRTWIYVSNECRVRELLMGIHQNLMSNHACECRRSSNKRKCKKHNEAVNNSDDISNLSDDELKKKVWECLKWEKYLLVLDDLWKIQDWDEVKDAFPDENRGSRILITSRLKEVASHTSRDPPYCLQFLNEEQSWELFSKKVFRGEEYHCDVGSLGKQIVKSCGGLPLSIVVLAGLLANKEKSHREWSKVLGHVNWYLTRDETQVKDVVLKLSFDNLHSKLKPCFLYLGIFPEDSEIYVRQLLHLWVAEGFIQETGSRDPNDVAEDYLYELIDRSLIQVARVKDSGGVKTCRIHDLLRDLCILESKEDNLFQVCTDNNILIPTKPRRLSVHSSMSHYVSSSPNDHSCVRSLFCSDPNCFVYSNDWKWLCKGFKLVRVLDLWGKYCCEIPSNLGNFVHLRYLRIGSQCIRSVPDSICNLQNLQTLDFRSTTRTTTISFPYGITKLKHLRQLYTFQPIMLRGRRSDSEVMWNLQTISSIVLNKDTTYLIEKGSFPKLRKLRLHIYSNFNRDVPKMLLSLQHLRHLNKLEIYFDTSDWCSRRKISYEFEEVLQRLKQYKPEKVLQSLKHLRYLRILKITNALDLVTSVPMFPLNITKLTLSCITCLNDDVMKAIGSLTQLQILILTGKKFWPSDSFSDLNCVEDGFPELQEFRMEVLPIQNLKLVNGSMPRLQILVIHNCYKLDSLPSELWSLTTLRKVCVRKPSNAMAAMVQKLEVNNGCEVIVE* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2487 939 PRINTS Disease resistance protein signature 188 203 - -
Tpr3g2487 939 PRINTS Disease resistance protein signature 379 393 - -
Tpr3g2487 939 PRINTS Disease resistance protein signature 632 648 - -
Tpr3g2487 939 PANTHER DISEASE RESISTANCE PROTEIN RP 54 936 IPR044974 GO:0006952
Tpr3g2487 939 CDD RX-CC_like 2 124 IPR038005 -
Tpr3g2487 939 Gene3D - 344 429 IPR042197 -
Tpr3g2487 939 Gene3D - 145 338 IPR027417 -
Tpr3g2487 939 Gene3D Ribonuclease Inhibitor 530 935 IPR032675 -
Tpr3g2487 939 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 444 IPR027417 -
Tpr3g2487 939 Gene3D - 430 519 IPR036388 -
Tpr3g2487 939 Gene3D - 5 111 - -
Tpr3g2487 939 Pfam NB-ARC domain 172 430 IPR002182 GO:0043531
Tpr3g2487 939 Pfam Rx N-terminal domain 5 86 IPR041118 -
Tpr3g2487 939 PANTHER - 54 936 - -
Tpr3g2487 939 SUPERFAMILY L domain-like 508 914 - -
Tpr3g2487 939 MobiDBLite consensus disorder prediction 129 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2487 Tpr-Chr3 23853364 23856998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2487 175 516 WRKY Transcription Factor Family AT5G45050 23.032 5.77e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2487 - - gmx:100814688 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2487 3 23853364 23856998 Tpr3g2487 3 23853364 23856998 ECH