Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2483 ATGAAGGATGCAGATGTGTCAAAGCAGATCCAACAGATGATTAGGTTCATCCGCCAAGAAGCTGAGGAGAAAGCTAATGAAATTTCTGTCTCTGCAGAGGAGGAATTCAACATTGAGAAACTACAATTACTTGAAGCTGAAAAACGGAAGATCAGGCAAGAGTACGAGAAAAAAGCCAAACAGATTGATGTTCGTAGAAAGATTGAATACTCAATGCAGTTGAATGCATCTCGTATAAAGGTACTCCAAGCACAAGATGAGGTGGTAAATTCTATGAAAGATGCTGCTAAGAAAGGACTTTTGAAAATCTCAAATGATAAGAAAGTATATAGGAAACTCATCAAAGATCTTATTATTCAGGGTCTACTACGTTTGGGGGAACAATCCGTGTTACTACGATGTAGAGAGGCTGATCGTAAGCTAGTTGAGTCGTTGCTAGAGGAAGCCAAAAAGGAATACTCTGAGAAAGCTAACGTGCAGCCCCCTAAGATTACCATTGATGATCGTGTTTATCTTCCACCACAACCAAAAAATGGCGCTGTGGATTCGCATGAACCTTTTTGTTCTGGAGGAGTAGTACTGGCCTCAGAGGATGGAAAGATAGTGTTGGAAAATACTCTTGATGCGCGACTTGATGTCATTTTTCGACAGAAGTTGCCTGAGATACGAAAGACTTTATTAAGTTCAACTTGA 693 0.4012 MKDADVSKQIQQMIRFIRQEAEEKANEISVSAEEEFNIEKLQLLEAEKRKIRQEYEKKAKQIDVRRKIEYSMQLNASRIKVLQAQDEVVNSMKDAAKKGLLKISNDKKVYRKLIKDLIIQGLLRLGEQSVLLRCREADRKLVESLLEEAKKEYSEKANVQPPKITIDDRVYLPPQPKNGAVDSHEPFCSGGVVLASEDGKIVLENTLDARLDVIFRQKLPEIRKTLLSST* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2483 230 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Tpr3g2483 230 Coils Coil 38 61 - -
Tpr3g2483 230 Coils Coil 7 27 - -
Tpr3g2483 230 SUPERFAMILY V-type ATPase subunit E-like 87 226 - -
Tpr3g2483 230 Gene3D - 92 230 IPR038495 -
Tpr3g2483 230 Pfam ATP synthase (E/31 kDa) subunit 16 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Tpr3g2483 230 Hamap V-type proton ATPase subunit E [atpE]. 8 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Tpr3g2483 230 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 ISOFORM X1 1 228 - -
Tpr3g2483 230 Gene3D - 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2483 Tpr-Chr3 23823056 23825664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2483 1 229 Primary Pumps ATPases(2) AT3G08560 70.742 1.79e-114 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2483 K02150 - gmx:100791813 394.43