Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2475 ATGGGAATAATCTCCGATACCCCTTCAGTTTCCACCGCCACAAAATGGCTCGGTTTTATTGCCGCTATTTGGATTCAATCCATCTCCGGCAACAACTACACATTCTCAAACTACTCCGACGCTCTCAAATCTCTCATGCACCTCACCCAATTACAGCTCAACAATCTCTCCGTCGCTAAAGACGTCGGTAAAGCTTTCGGCATCCTCGCCGGTCTTGCCTCCGACCGTTTACCCACTTGGGCCATTCTCCTCATTGGTTCCTTTGAAGGTCTTGTCGGTTATGGTGTTCAATGGCTTGTAGTTGGTCAAATCATTCAACCCCTTCCTTACTGGCAGATGTGTGTGTTTTTGTGTATGGGAGGGAACAGTACAACATGGATGAACACAGCGGTTTTAGTGACATGCATAAGAAACTTCCGGCGAAACAGAGGACCAGTTTCAGGGATTCTTAAAGGCTATGTTGGTTTAAGCACTGCAATTTTCACGAATCTTTGTTCTGCTTTAGTAGCAGATGACCCTGCTTTTTTTCTTCTAACACTTGCTGTTGCACCTTTCATCGTTTGTCTCACCGGAGTATTTTTCCTCCGTGAAGTTCCCGTTGCTAAAATTGCCACCGCCGCAGAAGATAACGAAGAAGGGAAGTATTTCGGTATCTGTAACGCCGTTGCCGTTGTTCTCGCCGTTTATCTTTTAGCTTATGGTTTTGTACCTAATGCTAATACATTAGTATCACGTGTTTTCGTTGCGGTTTTGTTAGTTCTATTGGCGTCACCGTTAGGGATTCCGGTATATGCATATTTCAAGGGAAGAAATTCGGGTCGGGTCGGAGGTGATGTTGAGGGTCAGCGGGTACGTGAACCTTTGATTCAAAATGGTGAAAAGGAAAGTGAGACGGTGGTGGATGCGGTGGTGGCGGAGACGGAAGTGGTTGTTGTTAAGGGACAACCGGTGATTGGAGAAGAACATACGATAATTGAAGTGATGAAGAGTTTGGATTTTTGGATCTTGTTTGTTTCGTTTCTATGTGGAGTTGGAACGGGTTTAGCAGTGATGAATAATATGGGTCAAATCGGGTTGGCTCTCGGGTATACGGATGTATCCTTATTTGTTTCGTTAACTAGTATTTGGGGATTTTTTGGAAGGATCGTATCTGGTTCCGTTTCAGAGCATTTCATCAAGAAATCTGCAACACCTAGACCTCTTTGGAATGCAATATCTCAAATTCTAATGGCTGTGGGCTACATACTTCTAGCCCTGGCTATGCCCGGTTCACTATACATCGGTTCTGTTATCGTTGGCATCTGTTATGGAGTGCGTCTTGCCGTCACAGTCCCAACAGCCTCCGAGTTATTTGGACTCAAATACTATGGTCTCATATACAATATTCTCATCCTCAATCTTCCACTTGGATCTTTCCTCTTTTCTGGGCTACTTGCCGGCATACTCTACGATATGGAAGCAACCACAACAGAAGGAGGCGGTAACACATGCGTTGGAGGTCATTGTTATAGGCTAGTGTTTATAGTCATGGCTGGAGCATGTGTTGTTGGATTCTTCTTAGACATTTTATTGGCAATTAGAACCAAGAGTCTCTACAACAAGATTTGCATGAGTAAGAAATCAAAGAAATCCTCAGTGACATCAAGTAGCTAG 1653 0.4422 MGIISDTPSVSTATKWLGFIAAIWIQSISGNNYTFSNYSDALKSLMHLTQLQLNNLSVAKDVGKAFGILAGLASDRLPTWAILLIGSFEGLVGYGVQWLVVGQIIQPLPYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTNLCSALVADDPAFFLLTLAVAPFIVCLTGVFFLREVPVAKIATAAEDNEEGKYFGICNAVAVVLAVYLLAYGFVPNANTLVSRVFVAVLLVLLASPLGIPVYAYFKGRNSGRVGGDVEGQRVREPLIQNGEKESETVVDAVVAETEVVVVKGQPVIGEEHTIIEVMKSLDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYTDVSLFVSLTSIWGFFGRIVSGSVSEHFIKKSATPRPLWNAISQILMAVGYILLALAMPGSLYIGSVIVGICYGVRLAVTVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTEGGGNTCVGGHCYRLVFIVMAGACVVGFFLDILLAIRTKSLYNKICMSKKSKKSSVTSSS* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2475 550 Gene3D MFS general substrate transporter like domains 12 207 IPR036259 -
Tpr3g2475 550 Gene3D MFS general substrate transporter like domains 327 531 IPR036259 -
Tpr3g2475 550 PANTHER - 6 548 - -
Tpr3g2475 550 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 548 - -
Tpr3g2475 550 SUPERFAMILY MFS general substrate transporter 32 530 IPR036259 -
Tpr3g2475 550 Pfam Nodulin-like 15 263 IPR010658 -
Tpr3g2475 550 CDD MFS_Mch1p_like 15 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2475 Tpr-Chr3 23722451 23725385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2475 13 544 Nodulin-like Gene Family AT4G34950 70.217 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2475 - - gmx:100807372 796.193