Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2452 ATGAGATGGTTCAGAAAAGAACCTGGAGGAAATGAATCAAGAGATGTTTTGGGATTGAACATAACAAAACAGAACAACACAATGACAGTTGAAAAGAGATTTGTTCTTGTTGGGATTAGAATAGATAACCAAAGCAGACAGCTTCTCAATTGGGCTATTATTAAAGTTGCTCAACCTGGTGATTCTGTTATTGCTATACATGTAGTTAAAACTAAAAGTTCAGATTATGTTTCCAAAAACAAGAGCCTCATAGATGGCTATTTAGAGGTTTATGAAGGCTTGTGTGATATGAAGAAGGTTGGTCTTTCTGGTCAAATCTTAACAGGAAAGTCCATTAAGGATATTCTTGTTAGAGAAGCAAGAAACCAGGGTGCTTTGGCTCTCGTGGTAGGGGGTAAATCTGCCACAGCTAAATATTGCGCCAAACGGCTTCCACCCACCATCAATGTTCTGGCCATCCAAGATTCAAGGATTGTCTTTGGAAGGTGTAACAATAAACAACCATCAGGTAGTCTTATATTGGATCCAAGTCCAAGTTTAGCAAGCATAGATAACCTGAGTGACAAAATAATCCAATCTGAATTTGGTTTTCCCGTGATGGAGAGTGAGAAATCGCCGCGCCAAAATACCAAGGAATCGAAAGAAGAAACACTTGAGGAATCAGAAAAGTACAAGTCACGGTCGATATCCATGTTTGTAGGCGACCCTTCTGAGCCGAAGCTTGGATGGCCTTTACTCCGCAGAGCGAATTCAGAAATGTCACCAAACCATCATGGAAGGGACATGTCTGTAGTACAATGGGTAATGACCTTACCAGATCGTTCACCACATAGTAGTTCTCAATCATCTTCCAGCGACGAAAATCTATTCGAGAGGAGCATCAGTGAAATTGAGGATGAGAGCTTCAAAAATTATTCACCTTCATCTGTTCTACTACCAAAAGGCATAGAAGGGATATTAAATCTAAATTCACTTAATTGCAAGTGGTTCAGCCTTGAGGATCTCAACTCCTGCACAAGCCAATTCTCTTCAGATAACTTGATCGGGAAAGGCGGGAGCAACCGTGTGTACAAAGGAGTACTCCCTGACGGAAAGCCAATTGCAGTTAAAGTATTGAATTCATCAAAAGAAGCATTGAAAGATTTTGCCTTTGAGATGGAAATAATATCCTCATTGAAGCACAAAAACATTACTCAACTACATGGAATTTGCATAGAGGACAATACTTTAATATCTGTTTATGATTATTTTTCTAAAGGAAGCTTAGAGGAAAATCTACATGGAAAGAACAAGGATGGATCCCTTTTATCATGGGAAGTGAGATTTAATGTAGCTGTTGGAATCGCCGAGGCGCTTGATTACCTACACAAAGAAGCTTTGAAGCCTGTTATACACAGAGATATCAAGTCTTCAAACATTCTTCTTTCCAAGGAACTTGAACCACAATTGTCTGATTTTGGACTTGCTATTTGGGGACCAACAACTTCATCCTTTTTGACAAAACAAGATGTAGTAGGAACATTTGGTTACCTTGCTCCTGAATACTTCATGTATGGAAAAGTCAGCGATAAGATCGATGTCTATGCCTTTGGTGTCGTACTACTTGAATTGATATCAGGTAGGGAACCAATCAGCTCTGAATCTTGCAAAGGACAGGAGAGCTTGGTAGCTTGGGCAAAACCAATAATAGAGAGTGGAAATATCAAAGGTTTGTTAGATCCAAAATTAGAAGGGAAGATTGATGAAACCCAAATGCAAAGAATGGTTTTAGCAGCATCTTTATGCATCACACGGGCTGCTAGACTTCGTCCTAAATTTAATCAGATACTGAAGATCCTAAAAGGGGGTGATGAAATTGAATATTGCTTCAATGAACATTCAGAGAATGAAGAAAACATTGATGATGAAGTGTATCCAAATTCAAGTACAGAGTTACACCTAACTCTTGCATTACTTGGTGTTGATGAAGACAGTACATCTTCTAGTAGTACAGACCATAGTGAAAACTTGAAAGACCGATGGAGCAGCAGGTCTTCAAGTTTTAATTAA 2049 0.3899 MRWFRKEPGGNESRDVLGLNITKQNNTMTVEKRFVLVGIRIDNQSRQLLNWAIIKVAQPGDSVIAIHVVKTKSSDYVSKNKSLIDGYLEVYEGLCDMKKVGLSGQILTGKSIKDILVREARNQGALALVVGGKSATAKYCAKRLPPTINVLAIQDSRIVFGRCNNKQPSGSLILDPSPSLASIDNLSDKIIQSEFGFPVMESEKSPRQNTKESKEETLEESEKYKSRSISMFVGDPSEPKLGWPLLRRANSEMSPNHHGRDMSVVQWVMTLPDRSPHSSSQSSSSDENLFERSISEIEDESFKNYSPSSVLLPKGIEGILNLNSLNCKWFSLEDLNSCTSQFSSDNLIGKGGSNRVYKGVLPDGKPIAVKVLNSSKEALKDFAFEMEIISSLKHKNITQLHGICIEDNTLISVYDYFSKGSLEENLHGKNKDGSLLSWEVRFNVAVGIAEALDYLHKEALKPVIHRDIKSSNILLSKELEPQLSDFGLAIWGPTTSSFLTKQDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPISSESCKGQESLVAWAKPIIESGNIKGLLDPKLEGKIDETQMQRMVLAASLCITRAARLRPKFNQILKILKGGDEIEYCFNEHSENEENIDDEVYPNSSTELHLTLALLGVDEDSTSSSSTDHSENLKDRWSSRSSSFN* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2452 682 Coils Coil 207 227 - -
Tpr3g2452 682 ProSiteProfiles Protein kinase domain profile. 342 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2452 682 SMART serkin_6 342 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2452 682 SUPERFAMILY Protein kinase-like (PK-like) 324 613 IPR011009 -
Tpr3g2452 682 PANTHER OS08G0249100 PROTEIN 30 663 - -
Tpr3g2452 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Tpr3g2452 682 MobiDBLite consensus disorder prediction 205 222 - -
Tpr3g2452 682 Pfam Protein kinase domain 344 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2452 682 MobiDBLite consensus disorder prediction 656 682 - -
Tpr3g2452 682 MobiDBLite consensus disorder prediction 198 222 - -
Tpr3g2452 682 Gene3D Phosphorylase Kinase; domain 1 316 416 - -
Tpr3g2452 682 Gene3D HUPs 19 139 IPR014729 -
Tpr3g2452 682 CDD USP_Like 35 145 - -
Tpr3g2452 682 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK7 ISOFORM X1 30 663 - -
Tpr3g2452 682 Gene3D Transferase(Phosphotransferase) domain 1 417 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2452 Tpr-Chr3 23442406 23446726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2452 329 679 Trihelix Transcription Factor Family AT5G38560 38.655 3.57e-72 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Tpr3g2452 Pkinase 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2452 - - gmx:100789189 946.421