Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2444 ATGGGTATTCGTTTGCCATATATGGTTCTTCAAGCAAAACAGATATTCAAGTCCACTGCCTCAACATCACAGCTTCATAATGGATCAAAACAATCCAACAATGTTCCAAAGGGACACATAGCAGTTTATGTTGGAGAGTTGCAAAAGAAGAGGTTTGTGGTTCCAATATCTTACTTGAACCATCCTACCTTTCTTGATTTGCTTAACAGAGCGGAAGAAGAGTTTGGTTACAATCATCCTATGGGTGGTCTCACAATTCCTTGCAAAGAAGATGCATTCATCAATCTTACATCTCAACTACGTTCCTTGTGA 312 0.391 MGIRLPYMVLQAKQIFKSTASTSQLHNGSKQSNNVPKGHIAVYVGELQKKRFVVPISYLNHPTFLDLLNRAEEEFGYNHPMGGLTIPCKEDAFINLTSQLRSL* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2444 103 Pfam Auxin responsive protein 17 98 IPR003676 GO:0009733
Tpr3g2444 103 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE 1 102 - -
Tpr3g2444 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2444 Tpr-Chr3 23378027 23378556 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2444 17 93 Calmodulin-binding Proteins AT5G20810 44.156 4.89e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2444 K14488 - cam:101504274 164.466