Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2443 ATGAAGACAACAAGTAACAGATTTGTGGGAATAGTTCAAGCTAAACAGAAACTTCAAAGAACACTTTCACAAAGAATTAGAATGGCTTCATCTGGTTGTGATGTTCCAAAAGGCCACTTGGCAGTTTATGTTGGAAATGACCATAAGAGGTTTGTAATTCCAATATCATATTTGAGTCATCCTTTGTTTAGAGATTTATTGGATTGGGCTGAACAAGAATTTGGATTCAATCATCCAATGGGTGGTCTTACAATTCCATGCACTGAAGATTACTTCATTAGTCTAACTTCTTCTCTTAATTAA 303 0.3465 MKTTSNRFVGIVQAKQKLQRTLSQRIRMASSGCDVPKGHLAVYVGNDHKRFVIPISYLSHPLFRDLLDWAEQEFGFNHPMGGLTIPCTEDYFISLTSSLN* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2443 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 99 IPR003676 GO:0009733
Tpr3g2443 100 Pfam Auxin responsive protein 23 98 IPR003676 GO:0009733
Tpr3g2443 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 11 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2443 Tpr-Chr3 23353662 23354359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2443 34 92 Calmodulin-binding Proteins AT5G20810 62.712 4.47e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2443 K14488 - gmx:100781277 182.956