Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2442 ATGAACCACAATTTATATTTTTATAAAACCAACCCCGTGAAATTTCCACAGAACTTCGCGGTCCTTGCCTCCGTAATTATAACATATACAACGATGGGTTTTCGTTTACCTGGTATCATTAGAAGGTCATCATCATTTTCTGCAAACCGGGCAGTTTCAAAAGTTGTGGACGTGCCAAAGGGATATCTTGCTGTGTATGTGGGAGAGAAACAAAAGAGATTTGTGATCCCCGTATCATACTTGAACCAACCATTGTTTCAAGACTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCGATGGGTGGCCTCACCATTCCTTGCACCGAAGATTTCTTCCAAAATATAACTTCTCGCTTGAATGAGCTATGA 378 0.4074 MNHNLYFYKTNPVKFPQNFAVLASVIITYTTMGFRLPGIIRRSSSFSANRAVSKVVDVPKGYLAVYVGEKQKRFVIPVSYLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCTEDFFQNITSRLNEL* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2442 125 Pfam Auxin responsive protein 45 121 IPR003676 GO:0009733
Tpr3g2442 125 PANTHER AUXIN-INDUCED PROTEIN 6B 39 123 - -
Tpr3g2442 125 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 39 123 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2442 Tpr-Chr3 23329524 23330517 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2442 57 116 Calmodulin-binding Proteins AT3G43120 58.333 2.88e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2442 K14488 - gmx:100793401 154.836