Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2439 ATGGGTTTTCGTTTACCTAGTATCATCAGATCAAAGTCATCATCTTCAAAAGGTGTTCCAAAGGGATATCTAGCTGTGTATGTAGGAGAGGAAATGAAGAGGTTTGTGATTCCTGTATCATACTTGAACCAAATCTCATTCCAAGACTTATTAAGCCAATCTGAGGAACAATTCGGATATGACCATCCAATGGGTGGTATAACTATTCCTTGCAGTGAAGATGTTTTCGTAGAAATCACTTCTAGCTTGTTACACATCCTTAATAAATTTGAGACCTTTTCTCTGTTGAGTTTGTTCTTCCTTCAAACAAGCACAAAAATGGGTTTCCGCTTACAGTCTATTCTAAGGGCATCAGTAACTGCTAGACAAGCAGCATCAAAATCTGTAGAAATACCGAAGGGCTATGTTGCAGTGTATGTTGGAGAGAAACAGAAGCGGTATGTGGTTCAAATATCATACTTGAACCAACCATTGTTTCAAGACTTGTTGAATCAAGCTGAGGAAGAGTTTGGATATGATCATCCCACGGGTGGTCTCACCATTCCTTGCACAGAAGATGTCTTCCAACGTATAACTTCTAGTTTGAATGTGCTATAA 597 0.3886 MGFRLPSIIRSKSSSSKGVPKGYLAVYVGEEMKRFVIPVSYLNQISFQDLLSQSEEQFGYDHPMGGITIPCSEDVFVEITSSLLHILNKFETFSLLSLFFLQTSTKMGFRLQSILRASVTARQAASKSVEIPKGYVAVYVGEKQKRYVVQISYLNQPLFQDLLNQAEEEFGYDHPTGGLTIPCTEDVFQRITSSLNVL* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2439 198 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 108 196 IPR003676 GO:0009733
Tpr3g2439 198 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 83 IPR003676 GO:0009733
Tpr3g2439 198 PANTHER AUXIN-INDUCED PROTEIN 6B 13 83 - -
Tpr3g2439 198 PANTHER AUXIN-INDUCED PROTEIN 6B 108 196 - -
Tpr3g2439 198 Pfam Auxin responsive protein 119 195 IPR003676 GO:0009733
Tpr3g2439 198 Pfam Auxin responsive protein 12 82 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2439 Tpr-Chr3 23296881 23301498 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2439 19 76 Calmodulin-binding Proteins AT3G43120 53.448 5.74e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2439 - K14488 gmx:112997918 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2439 3 23296881 23301498 Tpr3g2439 3 23296881 23301498 ECH