Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2423 ATGTCACCGTCATCATCCTCCACCGGAAACTGCAGCAAAATCCGCCGCATTGTTCGTCTCCGACAAATGCTTCTCCGATGGAGAAAGAAAGCACGATTAACAACAACAACAACAAACTACTACGATGTACCGGAAGGACACGTGGCAGTATGTGTGGGTCCTAGTATGAGAAGATTCGTTGTTCGTGCTAGTTACTTGAATCATCCGATCTTCAAGAAGCTTCTGATGCAAGCGGAGGAAGAATACGGTTTTTGTAACCATGGACCGCTTGCGATTCCATGTGATGAGTCTTTGTTTGAAGAGGCTCTTCGGGTTATGGCCCGACCCGAACCTAGATTTTCTACGCTTGAAGATTTTCAGAGACGGTGCCACGTGGATGTTAGTAGTAGTAGTAGTAGTAGTAGTAATAATCAGTTTGTAGGAGAATCGAGGCCGTTACTTCATGATGACCCGATTTGTTGA 462 0.4545 MSPSSSSTGNCSKIRRIVRLRQMLLRWRKKARLTTTTTNYYDVPEGHVAVCVGPSMRRFVVRASYLNHPIFKKLLMQAEEEYGFCNHGPLAIPCDESLFEEALRVMARPEPRFSTLEDFQRRCHVDVSSSSSSSSNNQFVGESRPLLHDDPIC* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2423 153 PANTHER SMALL AUXIN-UP RNA-RELATED 9 149 - -
Tpr3g2423 153 Pfam Auxin responsive protein 19 105 IPR003676 GO:0009733
Tpr3g2423 153 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 149 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2423 Tpr-Chr3 23044580 23045283 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2423 9 147 Calmodulin-binding Proteins AT4G34750 49.664 1.02e-43 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2423 K14488 - gmx:100795345 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2423 3 23044580 23045283 Tpr3g2423 3 23044580 23045283 ECH