Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2420 ATGGCCGCAACTCAATCTCTCTCCCTCTCCAAACCCTCTCCTCTCTCTCCCCCTCTCACCACCACCCCCCGCTTCTTCTCAAAACCCTCTCTCCCTTCCTTCCTCTCCGAAACCACCCCTCGAAAACCCCTTTTCATCACTTCCTCCAAAAACCCAATTTCCGAAATCATCCTCTCAAACAAACCCAAATCATCTTCTCACAACGACGATGTTTTCATCGACGACGATAAGCCTCGTGAAGAGTGTGGCGTTGTTGGAATCTACGGCGACTCAGAAGCTTCACGGTTATGCTACTTAGCTCTCCATGCTCTCCAACACCGTGGTCAAGAAGGTGCTGGAATCGTCACCGTTAACAATAACGTTCTTCAATCCATCACCGGTGTAGGTCTCGTTTCCGATGTGTTTAACGAATCAAAGCTCGATCAGTTGCCTGGAAATTTGGCTATTGGTCATGTTCGTTACTCTACTGCTGGACAATCCATGCTGAAAAATGTTCAACCTTTTGTTGCTGGGTATCGTTTTGGTTCTGTTGGGGTTGCTCATAATGGTAATTTAGTTAATTATCGTACTTTAAGAGCTAAATTGGAAGAAAAAGGTTCGATTTTTAATACTACTTCTGATACTGAAGTTGTTCTTCATTTGATTGCTACTTCAAAGCATAGACCTTTTATTTTGAGAATTGTTGATGCATGTGAGAAGCTTGAAGGAGCTTATTCAATTGTGTTTGTTACTGAAGATAAACTTGTTGCTGTTAGAGATCCTTTTGGGTTTAGGCCTTTGGTTATGGGTAGGAGAAGTAATGGTGCTGTTGTTTTTGCTTCTGAGACTTGTGCTCTTGATTTGATTGAAGCTACTTATGAGAGGGAAGTGTTCCCTGGTGAGGTTATTGTGGTTGATAATAATGGGATTCAATCGCTTTGTCTTATGTCTCATCCGCAGCCGAAGCAGTGTGTCTTTGAGCATATTTACTTTGCTTTGCCTAATTCTGTTGTTTTTGGTAGGTCTGTATATGCATCACGTAGTCGATTTGGGGAGATACTTGCTACCGAGAGTCCTGTTGATTGTGATGTTGTGATAGCAGTTCCTGATTCTGGTGTTGTGGCTGCTCTTGGTTATGCTGCCAAAGCCGGTGTTCCTTTTCAGCAAGGGTTGATTAGGTCACACTATGTAGGAAGGACTTTCATTGAGCCGTCTCAGAAAATTAGGGACTTTGGTGTCAAGTTGAAGCTTTCCCCAGTTCGTGCTGTACTTGAAGGTAAAAGGGTTGTTGTCGTTGATGATTCGATTGTGAGGGGAACAACATCATCTAAGATTGTGAGGTTGCTTAAAGAAGCAGGTGCTAAAGAAGTTCACATGAGAATTGCAAGTCCTCCGATTATTGGTTCTTGTTATTATGGTGTTGATACACCTAGCTCAGAGGAGTTGATATCTAATAGGATGAGTGTTGAGGAAATAAGGGATTTTATTGGATCGGATTCACTTGCTTTTCTTCCAATTAACAGCTTGCATAATATGTTGGCTGATGACTCTCCTAATTTTTGTTATGCTTGTTTCTCCGGGAAATACCCTGTTGAGCCAAGAGAGCTTAAGGTTAAGAGGGTTGGTGACTTTGTTGATGATGGTTTGAATGGAAGTTTGGAACAAATTGATGGTGGTTGGGTTCAAGCTAACCGAAATACGAAAGAGGTGGATGCTTCTACTGGTCTTTAA 1710 0.4234 MAATQSLSLSKPSPLSPPLTTTPRFFSKPSLPSFLSETTPRKPLFITSSKNPISEIILSNKPKSSSHNDDVFIDDDKPREECGVVGIYGDSEASRLCYLALHALQHRGQEGAGIVTVNNNVLQSITGVGLVSDVFNESKLDQLPGNLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEEKGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVFPGEVIVVDNNGIQSLCLMSHPQPKQCVFEHIYFALPNSVVFGRSVYASRSRFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIRDFIGSDSLAFLPINSLHNMLADDSPNFCYACFSGKYPVEPRELKVKRVGDFVDDGLNGSLEQIDGGWVQANRNTKEVDASTGL* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2420 569 SUPERFAMILY PRTase-like 317 528 IPR029057 -
Tpr3g2420 569 Hamap Amidophosphoribosyltransferase [purF]. 81 522 IPR005854 GO:0004044|GO:0009113
Tpr3g2420 569 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 23 554 - -
Tpr3g2420 569 Pfam Glutamine amidotransferase domain 160 279 IPR017932 -
Tpr3g2420 569 Pfam Phosphoribosyl transferase domain 356 451 IPR000836 -
Tpr3g2420 569 TIGRFAM purF: amidophosphoribosyltransferase 82 523 IPR005854 GO:0004044|GO:0009113
Tpr3g2420 569 Gene3D - 341 505 IPR029057 -
Tpr3g2420 569 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 82 301 IPR017932 -
Tpr3g2420 569 CDD PRTases_typeI 344 455 IPR000836 -
Tpr3g2420 569 CDD GPATase_N 82 332 IPR035584 -
Tpr3g2420 569 MobiDBLite consensus disorder prediction 1 24 - -
Tpr3g2420 569 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 82 305 IPR029055 -
Tpr3g2420 569 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 23 554 - -
Tpr3g2420 569 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 82 523 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2420 Tpr-Chr3 23022518 23024666 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2420 65 555 PRT Gene Family AT4G34740 83.943 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2420 K00764 - gmx:100801720 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2420 3 23022518 23024666 Tpr3g2420 3 23022518 23024666 ECH