Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2419 ATGGGAGATAGTGAAGATGGTAACAATGAAATGCTTCAGAGACTTCATTCTTCTTCTGCTTCATCTTTTATGAAACAACAACAACTGAATAATCATATGGAACAATTAAGTATACCACAGTTTAATTCCTCACAAATGAGAACCGTTGGTAGAAATCAGCATCATAATCAAAGGGCAGGTATGCCACCATCACACCCACATCAGATCCCGCCTATTTCACCATACTCTCAGATCCCGGTTTCACGGACGACGCAAATGTCTTCTCATAATACTAGTCCTACACCTTCACACACTCGATCACTCTCTCAACCGTCTTTTTTCTCTCTCGATTCTCTTCCACCTCTTAGCCCTTGTTCATTTCGTGAATCTTCTGACAATAATAACAACGCTGACGTGTCTATGGAAGATCGTGACGTCACTTCTCACTCTCCGTTACCACCGTTTGCTAGAAACCCTTCTTTACCGCCTCGGAAATCGCACCGTCGTTCCAACAGTGATATTCCGTTTGGATTTTCAACTGTTTTGCAGTCTTCACCGCCGTTGATTCCTCTCAGAGGAAGAGAAATTGGTAAACCTAATTCGTCGGTGGTGAAAAGAGAATTTGAACATAGTAATGTGGAGGAGAAGAAATCTTTATCTCCTGAAGGTGAAGTTGTGGATGATCTTTTCTCTGCTTATATGAATTTGGATAATATTGATGCAATTAACTCGTCTGGGACCGATGACAAAAATGTCGCGGTTGATAATAATAATCGCGATGATTTGGATAGTAGAGCAAGTGGAACGAAGACGAATGGTGGTGGTGATAGTAGTGATAATGAAGCTGAAAGTAGTGTTAATGAGAGTGGGGATAGTATTCAGAGGAGGGAAGGGATGAAGAGAAGTGCTGGAGGTGATATTGCACCTACTAGTAGACATTATAGGAGTGTGTCGATGGATAGTTTTATCGGGAAGTTGAATTTTAATGATGAGTCGTTTAAGCTACCACCTTCGCCTGGAGGATTGGTTTCTCCGGGTAATTCGGGCGATGGGAATTCGGCAGCTTTTAGTTTGGAGTTTGGGAACGGTGAGTTTAGTGGGCCGGAATTGAAGAAAATTATGGCTAATGAAAAACTTGCTGAGATTGCTATGGCTGATCCAAAGCGTGCTAAGAGGATTTTGGCTAATAGGCAATCGGCTGCACGATCCAAAGAACGCAAGATGCGTTACATTTCAGAGCTAGAACACAAGGTTCAGACTCTGCAGACCGAAGCTACTACACTTTCTGCACAACTTACTCTGTTGCAGAGAGATTCTGTTGGACTCACTAACCAAAATAGTGAGTTGAAGTTCCGCCTTCAATCTATGGAACAACAGGCAAAACTCCGAGATGCTCTGAATGAGGCGCTTACTGCTGAGGTTCAAAGACTGAAGATAGCTACAGCTGAGCTGAATGGGGAGTCACATCCTTCTAGCTGCATGATTCAGCAACATTCTGGCAACTCTATGATGTTCCAACAACAGCATCAGCCTCCTACATCTCAGCAAAACATTCATATTCAACAACATCAACAGCAGCAGCAGCAGCAGCAACAACAGCAGAATGGTAACGCCAACTCAAAGAATGAATTAAAGCAGTAG 1620 0.4284 MGDSEDGNNEMLQRLHSSSASSFMKQQQLNNHMEQLSIPQFNSSQMRTVGRNQHHNQRAGMPPSHPHQIPPISPYSQIPVSRTTQMSSHNTSPTPSHTRSLSQPSFFSLDSLPPLSPCSFRESSDNNNNADVSMEDRDVTSHSPLPPFARNPSLPPRKSHRRSNSDIPFGFSTVLQSSPPLIPLRGREIGKPNSSVVKREFEHSNVEEKKSLSPEGEVVDDLFSAYMNLDNIDAINSSGTDDKNVAVDNNNRDDLDSRASGTKTNGGGDSSDNEAESSVNESGDSIQRREGMKRSAGGDIAPTSRHYRSVSMDSFIGKLNFNDESFKLPPSPGGLVSPGNSGDGNSAAFSLEFGNGEFSGPELKKIMANEKLAEIAMADPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKIATAELNGESHPSSCMIQQHSGNSMMFQQQHQPPTSQQNIHIQQHQQQQQQQQQQQNGNANSKNELKQ* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2419 539 Coils Coil 397 431 - -
Tpr3g2419 539 MobiDBLite consensus disorder prediction 260 285 - -
Tpr3g2419 539 CDD bZIP_plant_RF2 382 431 IPR044759 GO:0003700|GO:0006355
Tpr3g2419 539 MobiDBLite consensus disorder prediction 495 539 - -
Tpr3g2419 539 Pfam bZIP transcription factor 381 435 IPR004827 GO:0003700|GO:0006355
Tpr3g2419 539 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 379 442 IPR004827 GO:0003700|GO:0006355
Tpr3g2419 539 MobiDBLite consensus disorder prediction 11 59 - -
Tpr3g2419 539 MobiDBLite consensus disorder prediction 82 102 - -
Tpr3g2419 539 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 101 536 - -
Tpr3g2419 539 MobiDBLite consensus disorder prediction 134 162 - -
Tpr3g2419 539 SMART brlzneu 377 441 IPR004827 GO:0003700|GO:0006355
Tpr3g2419 539 MobiDBLite consensus disorder prediction 1 68 - -
Tpr3g2419 539 Gene3D - 380 432 - -
Tpr3g2419 539 Coils Coil 460 480 - -
Tpr3g2419 539 SUPERFAMILY Leucine zipper domain 381 432 IPR046347 GO:0003700|GO:0006355
Tpr3g2419 539 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 101 536 - -
Tpr3g2419 539 MobiDBLite consensus disorder prediction 243 305 - -
Tpr3g2419 539 MobiDBLite consensus disorder prediction 195 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2419 Tpr-Chr3 23013641 23017354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2419 1 500 bZIP Transcription Factor Family AT4G38900 57.749 3.76e-170 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr3g2419 bZIP_1 5.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2419 - - mtr:MTR_4g072090 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2419 3 23013641 23017354 Tpr3g2419 3 23013641 23017354 ECH