Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2385 ATGGTTTGTTGGTCTTTCTACAGTGTGGATCCTTCTAATGTGCGGCATCAGAAAGGCAGTTGTGGTAAAGCACTTGCCGAGCACGAAAAGAAGTTCCAAAATAACGAGAAAAACATGGAGCGGTTGTGTCGATGGAAGATAGCTCTTAACCAAGCTGCTAACATTGCTGGCTACCATTTCAATATTGGATCAGACATGAATGAATATGAACACACGCTTATTGGAGATATAGTTCAAGTTGTTTCCAATAAGATGAAGCGAACTCCTTTACATGTTGTTGATTACCCTGTTGGACTCAAGTCTCGAGTAAGTAACGTGAACTCACTTCTGAATGAGGCTTGTAATGATGAAGTTTGCATGATTGGGATTCATGGAACAGGAGGAATTGGTAAATCAACACTTGCTCGAGCAGTTTATAATTTTATTGCTGATCAATTTGAGTGTTTATGTTTCCTGCACAATGTGAGAGAAAATTCAGCGAAACATGGTTTGAAACATCTCCAAGAGCAACTCCTTTACAAAACAATCAGATTGAAAGTGAAGATAGGAGGTGTCAGTGAAGGAATTGGAATCATTAAAGAACGGCTACGTCGAAAGAAGGTCTTATTGATTCTCGATGACGTTGACGAGTTGAAGCAGCTAAAATTTTTGGCCGGAGGATTTGATTGGTTTGGTCGTAACAGCAGAGTCATCATTATCACTCGAGACAAAAGTTTGTTAACATGTCATGGGATTGAAAGAATATATGAAGTAGAAGGCTTAAATCATGGTGAATCTCTTGAATTGTTTAAGCAGGTGGCTTTTAAAACTAAGAAAGTTGATTCAATTAATGATGATATTGTCAACCGTGCAATTAGTTATGCTTCTGGCCTTCCATTAGCTATAGATGTCATAGGTTCCAATTTGGCAGGAACGCCTATAGCAGAATGGGAATCTACATTAGATAAATACAAAAGGATTCCTCCTGATGATATCCAAAATATACTAAAAGTTAGCTTTGATGGTTTGGATGAAGAACAGAAAAATCTCTTTCTAGATATTGCATGTTTCTTTAAAGGGTTTCATTTGGGACAAATTCGTGCTAATTACGATCATTGCATGAAACATGATGTTGGAGTGTTGGTTGATAAATCTCTCATAAAGATTCATCAATTTGGTGATGTGATA 1167 0.3736 MVCWSFYSVDPSNVRHQKGSCGKALAEHEKKFQNNEKNMERLCRWKIALNQAANIAGYHFNIGSDMNEYEHTLIGDIVQVVSNKMKRTPLHVVDYPVGLKSRVSNVNSLLNEACNDEVCMIGIHGTGGIGKSTLARAVYNFIADQFECLCFLHNVRENSAKHGLKHLQEQLLYKTIRLKVKIGGVSEGIGIIKERLRRKKVLLILDDVDELKQLKFLAGGFDWFGRNSRVIIITRDKSLLTCHGIERIYEVEGLNHGESLELFKQVAFKTKKVDSINDDIVNRAISYASGLPLAIDVIGSNLAGTPIAEWESTLDKYKRIPPDDIQNILKVSFDGLDEEQKNLFLDIACFFKGFHLGQIRANYDHCMKHDVGVLVDKSLIKIHQFGDVI 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2385 389 Gene3D - 1 82 IPR035897 -
Tpr3g2385 389 PRINTS Disease resistance protein signature 120 135 - -
Tpr3g2385 389 PRINTS Disease resistance protein signature 195 209 - -
Tpr3g2385 389 PRINTS Disease resistance protein signature 288 302 - -
Tpr3g2385 389 Pfam TIR domain 6 89 IPR000157 GO:0007165
Tpr3g2385 389 Gene3D - 83 247 IPR027417 -
Tpr3g2385 389 PANTHER ARCHAEAL ATPASE 2 384 - -
Tpr3g2385 389 Pfam NB-ARC domain 102 318 IPR002182 GO:0043531
Tpr3g2385 389 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 347 IPR027417 -
Tpr3g2385 389 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 384 IPR044974 GO:0006952
Tpr3g2385 389 Gene3D - 253 337 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2385 Tpr-Chr3 22628596 22632341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2385 97 384 WRKY Transcription Factor Family AT5G45050 33.904 7.44e-46 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2385 - - mtr:MTR_6g478020 468.003