Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2384 ATGGAAGTTGTTGTAGCAAAAGCGTTGAAACCAAGCTTGAGAACAGAATCTATTTTTCAACAAACAATTTGTGAAGAGATTTTGTGTTTGAACGCTAACAACGTTGTTGTCGGTGAAGATTTTTCCGTTGATGACTACTTACTTGACTTTTCCAACGGTGAGTTTCAACATGGTTCTGTCGGAAAAGAAATTGATGATTACGAGGAAGAAGAAGAAGAAGAACATGAAAAAAACAGCACCACCTCGGTTTGTTCACAGGACCGAATAGAAGATGACGGTAATTCCAATTCGACGACTTTTTCCGGTGCCGGCGACGGCGAGTCTGACTCCATTTTTGCCGGCGGATTATCAGTTCCGGCTGATGATGTTGCGGATTTGGAATGGGTATCTCAGTTTGTTGACGATTCTGTCCCGGAACTTTCTCTATTGTATCCGGTTCAGGCCCGGGTCGAACCAGAACCTAGACCGGGCCCAACAAAAGCTACTTCCCAACTCTCATTAATTCGCAAAAAACCCAGAACCAACAAACCTAGAAGGCCCAACTGTAACATGTGGGCCTTCAACCCAGTACTCTGCTCCGTAAAGAAGCACAGGAAAAAGCCCGAGGCTCAAACGGGTGGAGCCCAATTTCAAAGAAGGTGCAGCCACTGCCAGGTGCAGAAAACCCCACAGTGGAGAGCCGGTCCGCTTGGGCCAAAAACACTCTGCAACGCTTGTGGTGTTCGGTTTAAATCCGGTCGGCTGTTTCCGGAGTATAGACCGGCTTCAAGCCCGACGTTTTCCGGTGATATTCACTCGAACAGCCACCGTAAGGTTTTGGAGATGAGGCGGAGGAAGGAGACCGATGAACCGGAGACCGGTCTAGACCGGAATTAA 876 0.4783 MEVVVAKALKPSLRTESIFQQTICEEILCLNANNVVVGEDFSVDDYLLDFSNGEFQHGSVGKEIDDYEEEEEEEHEKNSTTSVCSQDRIEDDGNSNSTTFSGAGDGESDSIFAGGLSVPADDVADLEWVSQFVDDSVPELSLLYPVQARVEPEPRPGPTKATSQLSLIRKKPRTNKPRRPNCNMWAFNPVLCSVKKHRKKPEAQTGGAQFQRRCSHCQVQKTPQWRAGPLGPKTLCNACGVRFKSGRLFPEYRPASSPTFSGDIHSNSHRKVLEMRRRKETDEPETGLDRN* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2384 291 MobiDBLite consensus disorder prediction 259 291 - -
Tpr3g2384 291 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 211 271 - -
Tpr3g2384 291 Gene3D - 207 259 IPR013088 GO:0006355|GO:0008270
Tpr3g2384 291 MobiDBLite consensus disorder prediction 267 291 - -
Tpr3g2384 291 MobiDBLite consensus disorder prediction 150 180 - -
Tpr3g2384 291 CDD ZnF_GATA 213 270 IPR000679 GO:0006355|GO:0043565
Tpr3g2384 291 SMART GATA_3 208 258 IPR000679 GO:0006355|GO:0043565
Tpr3g2384 291 PIRSF Txn_fac_GATA_plant 18 290 IPR016679 GO:0003677|GO:0005634|GO:0045893
Tpr3g2384 291 ProSiteProfiles GATA-type zinc finger domain profile. 212 244 IPR000679 GO:0006355|GO:0043565
Tpr3g2384 291 PANTHER GATA TRANSCRIPTION FACTOR 194 288 - -
Tpr3g2384 291 PANTHER GATA TRANSCRIPTION FACTOR 1 191 - -
Tpr3g2384 291 Pfam GATA zinc finger 214 247 IPR000679 GO:0006355|GO:0043565
Tpr3g2384 291 PANTHER GATA TRANSCRIPTION FACTOR 1 191 - -
Tpr3g2384 291 PANTHER GATA TRANSCRIPTION FACTOR 194 288 - -
Tpr3g2384 291 MobiDBLite consensus disorder prediction 72 95 - -
Tpr3g2384 291 ProSitePatterns GATA-type zinc finger domain. 214 239 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2384 Tpr-Chr3 22623805 22625445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2384 40 282 C2C2-Gata Transcription Factor Family AT4G36240 44.747 4.64e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Tpr3g2384 GATA 1.5e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2384 - - gmx:100776188 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2384 3 22623805 22625445 Tpr3g2384 3 22623805 22625445 ECH