Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2367 ATGAAGATCCAGTGTGATGCATGTCAGAAACAAGAGGCTTCGTTGTTCTGCCCTGCAGATGAAGCAGCTATCTGTAATCACTGTGATCATACAATCCACCATGCCAACAAGCTCTCTGCTAAACACAAACGTTTCTCTCTTCACCACCCCACTTCCAAAGACATCCCTCTCTGTGATATCTGCAAGGAGAGACGTGCATATCTATTTTGCAAAGAAGACAGGGCAATACTTTGCAGAGAATGTGACATTCCTATCCATAGAGACACTGAACTTACCAAGAAACATAACAGATTTCTTCTCGCAGGCGTGAAGATCGGTGCTGCTGCTTCTTCTTCAGATCCAACAACTTCGAATGGCTCAGAAGTAAGAACCTCGCTTTCAAGAGAATCGCGACCAAGTTCATTTTCAAGTGAAAATAACCGTTGTTCTCGCACTTTCAAAGACAACATGGCTTGTGACACAGTTTCAACAAGTAGCATTTCTGAATACTTGATTGAATCAATTCCTGGTTACTGCATGGAAGACCTTTTTGATGCTTCTTTTGCACCTAGTGTTTACTGTAAGGATTATCAACAAAACCAAGATCATCAAGTTATAAGCATGTGTGACTCGGTACCACAATATGAAGTTAGATCCCCTCAGCTTAGCCTTAGTGCTAATTCGAACGTTCCACAGATTGATTCTTTAGATGGGGTTATGGAAATGCCAGTAACAAAAGCTGTCGAAGGATATTCGAGTTGGAGATACAATGTACTTTTGGATCGGTAG 768 0.4167 MKIQCDACQKQEASLFCPADEAAICNHCDHTIHHANKLSAKHKRFSLHHPTSKDIPLCDICKERRAYLFCKEDRAILCRECDIPIHRDTELTKKHNRFLLAGVKIGAAASSSDPTTSNGSEVRTSLSRESRPSSFSSENNRCSRTFKDNMACDTVSTSSISEYLIESIPGYCMEDLFDASFAPSVYCKDYQQNQDHQVISMCDSVPQYEVRSPQLSLSANSNVPQIDSLDGVMEMPVTKAVEGYSSWRYNVLLDR* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2367 255 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 198 - -
Tpr3g2367 255 PANTHER B-BOX ZINC FINGER PROTEIN 20 1 198 - -
Tpr3g2367 255 CDD Bbox1_BBX-like 57 100 - -
Tpr3g2367 255 SMART bboxneu5 53 100 IPR000315 GO:0008270
Tpr3g2367 255 SMART bboxneu5 4 47 IPR000315 GO:0008270
Tpr3g2367 255 Pfam B-box zinc finger 56 96 IPR000315 GO:0008270
Tpr3g2367 255 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Tpr3g2367 255 Gene3D Classic Zinc Finger 1 96 - -
Tpr3g2367 255 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Tpr3g2367 255 CDD Bbox1_BBX-like 5 47 - -
Tpr3g2367 255 MobiDBLite consensus disorder prediction 110 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2367 Tpr-Chr3 22466113 22468120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2367 1 193 C2C2-CO-like Transcription Factor Family AT4G39070 50.000 7.65e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Tpr3g2367 zf-B_box 6.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2367 - - gmx:100790232 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2367 3 22466113 22468120 Tpr3g2367 3 22466113 22468120 ECH
Tpr3g2367 3 22466113 22468120 Tpr2g1071 2 12554929 12557951 ECH