Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2358 ATGGGAGAGGTAGCGCCTGGAGGAGGTTGTTTACCTCCGATGGATCTATTCCGTTCGGAGCCGATGCAACTCATTCAGCTCATCATTCCCATCGAATCCGCTCATCGCACTGTTTCTTACCTCGGTGACCTTGGCCTCCTTCAGTTTAAAGATCTCAATTCAGAGAAGAGCCCTTTTCAAAGGACTTATGCAGCTCAGATTAAAAGATGTGGAGAGATGGCTCGTAAATTGCGTTTTTTCAAGGAACAAATGATTAAGGCAGGTGTTTCACCAAAAGGTTCCACAACAGAGTTTGATGCGAACATCGATAACATTGAGATAAAACTTGCAGAAATTGAGTCAGAGTTATCTGAGATGAATGCAAATGGTGAAAAGTTGCAACGCACGTACAATGAACTTGTTGAGTACAAGCTTGTTTTGCAGAAGGCTGGTGACTTTTTCCACTCAGCTCAAAGCCGTGCCGTAGAGCAGCAAAGAGAATATGAATCACGCCATCTGAGTGGGGAATCTATGGAAACACCTTTATTACAGGACCAAGAATTACCAGGTGATTCATCAAAGCCGGTTAAGTTGGGGTTTTTAGCAGGTCTTGTTCCCAGGGAAAAATCGGTGGCATTTGAGAGAATTTTATTTCGTGCTACTAGAGGCAATGTGTTTTTGAGGCAGACTGCTGTTGAGAATCCGGTCACGGACCCTGTTTCTGGAGAAAAGACTGAGAAAAATGTCTTTGTCGTCTTTTATGCTGGTGAAAAAGTGAAAGGCAAGATTCTAAAAATCTGTGATGCCTTTGGTGCTAATCGATACCCGTTTGCTGAGGAACTTGGAAAACAAGCTCAAATGATTTCTGAGGTTTCTGGAAAACTTGCAGAATTGAAGACCACCATAGATGCTGGACTTTTGCACCGAGTTAACTTGCTGCAAAATATTGGGACTCAATACGAGCAATGGAATCTTTTGGTGAGGAAGGAGAAATCCATTCACCATACCCTGAACATGCTAAGCCTTGATGTGACAAAAAAATGTCTTGTGGCTGAGGGGTGGAGTCCTGTTTTTGCAACAAAGCAGGTCCAGGATGCGTTAAAGCGGGCTGCAAAGGACTCTAATTCTCAAGTCAGTGCCATTTTGCAAGTTTTGCATACCAGGGAGTCACCACCTACCTACTTTCGCACGAACAAATTTACGTCTCCGTATCAAGGAATTATAGACTCATATGGGGTTGCCAAGTATCAAGAGGCGAATCCTACTGTGTTTACTGTTGTTACCTTTCCATTTCTTTTCGCCGTAATGTTTGGTGATTGGGGGCATGGAATATGTTTACTGCTTGCAGCTCTATATTTCATAGTCAGGGAGAAGAAACTTTCTAGCCAGAAGCTTGATGACATCACGGAGATGACTTTTGGAGGTCGTTATATTATTTTCATGATGGCACTCTTCTCAATCTACACTGGCTTTATCTATAATGAGTTCTTCTCTGTCCCTTTTCCACTCTTCGCCCCCTCTGCATATGAGTGCCGTGACCTTTCTTGCAGGGATTCTACAACAATAGGACTGATAAAAACGGGTCCTACTTACCCTTTTGGATTGGATCCTGTATGGCATGGTACACGTAGTGAATTACCATTCCTGAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGAGTTGCTCAAATGAACCTTGGAATTATAATGAGCTATTGCAATGCCAGGTTCTTCAAGAACAGCGTAAATGTATGGTTTCAATTTATCCCCCAGATGATATTTCTTAACAGTCTATTCGGCTACCTATCCCTTCTTATTATTGTGAAGTGGTGCACGGGTTCTCAAGCTGATTTGTACCACGTAATGATCTACATGTTCCTGAGCCCAACAGATGATTTGGGTGAGAACCAACTCTTTGCGGGTCAGAAAAATCTTCAGCTCGTGCTTTTGCTTCTGGCCGGTGTTGCTGTGCCCTGGATGCTGTTGCCAAAACCCTTTATTTTGAAGAAGCAACATGAAGCTAGGCACGGGGATGAATCATATGCACCACTTCCAAACACAGAGGAGAGCTTGCAAGTGGAGTCAAATCATGATTCCCATGGTCATGAGGAGTTTGAGTTCAGTGAAATTTTTGTACATCAACTCATCCACACCATAGAATTTGTACTTGGAGCAGTATCTAATACAGCATCTTACCTTCGTCTGTGGGCCCTTAGTCTTGCTCATTCAGAGTTATCAAGTGTATTCTACGAGAAGGTTCTGATGTTGGCATGGGGGTACAATAATGTGATTATCCTCATAGTTGGTTTAATTGTTTTCATTTTTGCTACCGTTGGAGTTTTACTTGTCATGGAAACTCTGAGTGCCTTCTTGCATGCATTGCGTCTTCACTGGGTGGAGTACCAAAACAAGTTTTATGAGGGTGATGGCTACTTGTTCCATCCTTTCTCGTTCTCATTGCTAGATGAAGAGGATGACGTGCTTTAA 2469 0.4269 MGEVAPGGGCLPPMDLFRSEPMQLIQLIIPIESAHRTVSYLGDLGLLQFKDLNSEKSPFQRTYAAQIKRCGEMARKLRFFKEQMIKAGVSPKGSTTEFDANIDNIEIKLAEIESELSEMNANGEKLQRTYNELVEYKLVLQKAGDFFHSAQSRAVEQQREYESRHLSGESMETPLLQDQELPGDSSKPVKLGFLAGLVPREKSVAFERILFRATRGNVFLRQTAVENPVTDPVSGEKTEKNVFVVFYAGEKVKGKILKICDAFGANRYPFAEELGKQAQMISEVSGKLAELKTTIDAGLLHRVNLLQNIGTQYEQWNLLVRKEKSIHHTLNMLSLDVTKKCLVAEGWSPVFATKQVQDALKRAAKDSNSQVSAILQVLHTRESPPTYFRTNKFTSPYQGIIDSYGVAKYQEANPTVFTVVTFPFLFAVMFGDWGHGICLLLAALYFIVREKKLSSQKLDDITEMTFGGRYIIFMMALFSIYTGFIYNEFFSVPFPLFAPSAYECRDLSCRDSTTIGLIKTGPTYPFGLDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIMSYCNARFFKNSVNVWFQFIPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFAGQKNLQLVLLLLAGVAVPWMLLPKPFILKKQHEARHGDESYAPLPNTEESLQVESNHDSHGHEEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLMLAWGYNNVIILIVGLIVFIFATVGVLLVMETLSAFLHALRLHWVEYQNKFYEGDGYLFHPFSFSLLDEEDDVL* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2358 822 PANTHER VACUOLAR PROTON ATPASES 7 820 IPR002490 GO:0033179|GO:0046961|GO:1902600
Tpr3g2358 822 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 7 820 - -
Tpr3g2358 822 Pfam V-type ATPase 116kDa subunit family 40 812 IPR002490 GO:0033179|GO:0046961|GO:1902600
Tpr3g2358 822 Coils Coil 102 129 - -
Tpr3g2358 822 PIRSF ATP6V0A1 12 821 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2358 Tpr-Chr3 22335784 22347112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2358 14 820 Primary Pumps ATPases(2) AT4G39080 78.121 0.0 1304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2358 K02154 - gmx:100810062 1432.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2358 3 22335784 22347112 Tpr3g2358 3 22335784 22347112 ECH