Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2355 ATGGGAAGAGGAACGGATGGAATAAAGAAAATGAAAAGGTCGAATTCGGTTAAGCTTTCGGATTTGGAGGCTATACAATCATCACTTCCAAGGAGGAGCTTATCTCAATCAAGAAAGTTGTTACCACTTCATGTTCCAACCACTGCAGCAGCCCCACAAAAGCAGAAGCCTTCGATGAGAAAGTCGGTCAATTATATGAAACCCACCAGAAGTTCAGATGCAAAAAAGGTGCTTTTGCCAGTGACTCTTCAGAATAACCAATGTGGTTCAGATAGTAAGAATCTGCGACCAAAATGTTCGAGTAGTTCAAAATCTAGTTCTGTTTCTAACAAAAACACGGCAAAAACTATGTCAAAATCATCTAGTATGAAATTGGTGAGAACATTAGCAAAGACTAGTTTTAAGCCAAGTCCAACGGCAGTGCTGCGTGCAGATATTAATGCAACATACAGAGCTACCTGCTCTTCAACATTGAAAGATTCCAAGTTCCCTGCACACCTTGTGCTTAATACTGGAGGAAGTGAGTCAGAGGGAGTTTCGGTCATGAAGGTTTGTCCATATACATATTGCTCTCTCAATGGAAACCACCGTGCTCATGGAAGGAGGCGCTTTCTGGAGAATCGAAAAAGTATAAAGCTGGAAGCTTCTGAAAGATTGAAGGTGCCTTGTGAGAAGAGGAAGAACTTTGATATTGAACAGACTGACTATGATGGAAAACCTGCATGCGATGAAGCTGGTAAGGGTAATCCAATAATCATTCCCTTAATACCAGAAATTGGTATAGATTTTTTGAATGAAGTATATGCCGAGGAAAGGGAAAAAGCATACAAAGTGGGAAAATCTGACACTGCCAAGCACCTTGAGGATCAAGAAGGTATCAAGTTTGCAATGGCGGTGGATGGCAACATAGCAGAAAAGGAAGGTATTTGTCAAGTAACTCCATGTTTGCCTTGTGATGATCTTACGAAGTCTGAGATCAATCCCAAGGTGGAATTCAAAAACTACTTTGACACTTCTGAAATTGAAGTAGATACCAAGGAAAGCTTTCACCATGAACTAAACTCTGAAGATGCACACAAAAACCACCCACCTAGCTGTTTTCATGAAGAAATATGCACCGGAAGCTACTGCCATGAGGTTAGTGACGACGAGGAACATGTGGAGAATATTGAATTGGATGATTCTGAATCCCAAGGTGCTGATATGGAGTGGGAGGAGAAACAATTTTGTCCAATCAACCATAAAGAGGATATTGGCTCTTCTGTCATCACACATGAGACTGACTCAAAATTTAAGTCCTTATCAGAGGGTTCACATGATATATTTGAAATGTGGCTAGGTGACATCCCTAGCAACCATTATGCAAACATTATAGTTGAAAAATCATTGCACGGCAAAGAAGAGAAAATCACAGATTTTGATGCACAACATCATGACACAAACTCTGTCCAGGAAAGCACAAGTGAAAGCATACAGACTGACTATCCATCTAAGAGCATAGATCACGAGTATGACCAATCTTATTTGGAAGAGGAAGAATTGCAGTATCTGAGAAACACAGAAGACAATAATAGAGAAATTGAAAAGCATGTGGATAAGGAGGTCATTTGTGCCTCGGTGGTACTTGATGAAGATACAATTGACACTAGTGAAGTTCACAATATCTGTGAAACTCGCAAGATTGAAGAGAGTCGTGAAGACAGCAACACAAACCTAGAGAGTAATGAAAAAGAAATTAGCCAAAGAAACCAAATTCCCTTATCTAATGTGCCTAAAGAGAGAACCATTATTGTTCAGGACCATGAATTTCTGGAGGAAGCTCAAGTTGCATCTACTGAGTTCCAGATCATAAGCAGCATAGGTGGTGAAGGGCAGAATACGAGCAATAATAGGCAATGGCCAGCTAAGAACAAGAGACCTATGAAAGATTCTGAGCAAATGAGAAAGATCAACCCTAGAAAGCCAAATTTCCTGCCCTTTGTTCCCGACGCAGAACCAGAGAGGGTTGAATTGAAGCATCAAATGATGGACGATAGAAAAAATGCAGAGGAATGGATGCTTGATTTTTCACTCAGACAAGCTGTCACAAAACTTGCTCCAGCCAGGAAAAAGAAGGTTGCATTACTTGTTGAAGCTTTTGAAACAGTAATGTCAACACCGGAATGTGAAACTCATACGAGAAACAATTCACCCTTAGTGCATGCAAGACCTATTCAAGCTTGTAGCTAA 2229 0.4042 MGRGTDGIKKMKRSNSVKLSDLEAIQSSLPRRSLSQSRKLLPLHVPTTAAAPQKQKPSMRKSVNYMKPTRSSDAKKVLLPVTLQNNQCGSDSKNLRPKCSSSSKSSSVSNKNTAKTMSKSSSMKLVRTLAKTSFKPSPTAVLRADINATYRATCSSTLKDSKFPAHLVLNTGGSESEGVSVMKVCPYTYCSLNGNHRAHGRRRFLENRKSIKLEASERLKVPCEKRKNFDIEQTDYDGKPACDEAGKGNPIIIPLIPEIGIDFLNEVYAEEREKAYKVGKSDTAKHLEDQEGIKFAMAVDGNIAEKEGICQVTPCLPCDDLTKSEINPKVEFKNYFDTSEIEVDTKESFHHELNSEDAHKNHPPSCFHEEICTGSYCHEVSDDEEHVENIELDDSESQGADMEWEEKQFCPINHKEDIGSSVITHETDSKFKSLSEGSHDIFEMWLGDIPSNHYANIIVEKSLHGKEEKITDFDAQHHDTNSVQESTSESIQTDYPSKSIDHEYDQSYLEEEELQYLRNTEDNNREIEKHVDKEVICASVVLDEDTIDTSEVHNICETRKIEESREDSNTNLESNEKEISQRNQIPLSNVPKERTIIVQDHEFLEEAQVASTEFQIISSIGGEGQNTSNNRQWPAKNKRPMKDSEQMRKINPRKPNFLPFVPDAEPERVELKHQMMDDRKNAEEWMLDFSLRQAVTKLAPARKKKVALLVEAFETVMSTPECETHTRNNSPLVHARPIQACS* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2355 742 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 3 742 - -
Tpr3g2355 742 MobiDBLite consensus disorder prediction 51 69 - -
Tpr3g2355 742 MobiDBLite consensus disorder prediction 622 642 - -
Tpr3g2355 742 MobiDBLite consensus disorder prediction 562 581 - -
Tpr3g2355 742 Pfam Plant calmodulin-binding domain 638 718 IPR012417 GO:0005516
Tpr3g2355 742 MobiDBLite consensus disorder prediction 28 77 - -
Tpr3g2355 742 SMART CaM_binding_2 605 718 IPR012417 GO:0005516
Tpr3g2355 742 MobiDBLite consensus disorder prediction 480 494 - -
Tpr3g2355 742 MobiDBLite consensus disorder prediction 89 122 - -
Tpr3g2355 742 MobiDBLite consensus disorder prediction 474 494 - -
Tpr3g2355 742 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 3 742 IPR044681 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2355 Tpr-Chr3 22321590 22324770 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2355 636 742 Calmodulin-binding Proteins AT2G38800 51.852 1.23e-28 119