Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2319 ATGCTGACGGAAGGAGGGATATTGGGAATTTGCAGTGACGATGGTGAAAGGCTTAATCAGGTGGTACTGCAAGTTATCGACGTGAAGCCGTTGCAGACACCGCCGTTAGCCGGCACTGTCGACGGGTACCGTGGCCTTACTTTCTCTGACGGTTCCCATTGTATCGTTGGATTTATCACCAAGAAACTGGAAGAATTGGTTCAATATGGAAAATTGAAGATAGGTTCCATTGTTGCGCTTACTCACTACTTTTTCAGCCAATTCAAGAACCGAAAGGTTCTTATCATCATGGAGCTAGAGATCGCAAGCTTCAAATGTGATTATGTGATTGGAAAACCTGTTCCACTACACAACTTAGGTGAGATTCTGCCAGAGGGGAATGTACCATTGTCTTATGCTGACGAGGACCTCCCCAATCGTTCCCAGGCTAAGGAGAAGAGGAAAAAGAGGACAGCCAAAGAATCTATCCCAAGATTGAAACTTGCTTTGACGAAGAAAGCTGAGTTGGAAAAGGTAGTCAGTGAGCTTTGCACTGCACAGTATAAACTCGGTTTCAAAAATGCTCAAGCTCAAGCGGTCTTGCTAAGCTCTGTAGGCGACGACCTTTCTGCTATGAACATGCTCAAAGTGGTGAAGAATGGTGAGATTGTTAGTGATGATGAGGAGGAAGAAGAATAA 678 0.4484 MLTEGGILGICSDDGERLNQVVLQVIDVKPLQTPPLAGTVDGYRGLTFSDGSHCIVGFITKKLEELVQYGKLKIGSIVALTHYFFSQFKNRKVLIIMELEIASFKCDYVIGKPVPLHNLGEILPEGNVPLSYADEDLPNRSQAKEKRKKRTAKESIPRLKLALTKKAELEKVVSELCTAQYKLGFKNAQAQAVLLSSVGDDLSAMNMLKVVKNGEIVSDDEEEEE* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2319 225 Gene3D - 1 117 IPR012340 -
Tpr3g2319 225 SUPERFAMILY Nucleic acid-binding proteins 2 106 IPR012340 -
Tpr3g2319 225 Pfam Replication factor-A protein 1, N-terminal domain 2 101 IPR007199 GO:0003677|GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2319 Tpr-Chr3 22018121 22021086 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2319 2 113 Core DNA Replication Machinery Family AT5G45400 31.624 5.92e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2319 - K07466 jre:109004017 65.855