Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2298 ATGTCGGAGTCCACAGCCACATCAACTTCTCTCATGAGTTTGAAGGTACTTATTCTAGCAGGAATTTTCCTCATCATCGTCATAATAATCGTGCTTTTCATCTTCCTCTGTTTTCGAAGTAACCGAACCAGCAAGAAACGGAAGCTGTTACCGAAGCTACATAGCTCCGGAACCACTCCTCTGGTTTCTAAGGAAATCGCGGTGGTTAAGGAAATTGATCTCACGCGCTCCACTGAACAAACGCGGATTCAGATTTTTGATGATGGTGATGTTGTTGATGAGAAGAAAGAGGCGGAGATTAAGGTTGAAATTGGAGGAGTTAGGAAAAGTGACGTGTCAGGTGGTGGGGTCCACATGGAGGAGGATCCAAATATAGGGTGGGGTCGGTGGTATAGTTTGAAGGAAGTGGAAATGGCGACACGTGGATTTTCTGAAGGGAATGTGATTGGTGAAGGAGGGTATGGTGTTGTTTATAGAGGTGTTTTGCAAGATTCTGTTGTGGCGGTGAAGAATCTTCACAACAACAAGGGTCAAGCTGAGAAGGAGTTTAAGGTGGAAGTTGAAGCCATTGGAAAAGTAAGGCATAAGAATTTAGTTCGTTTAGTAGGATATTGTGCAGAAGGTGCTCGAAGGATGCTTGTTTACGAATATGTTGAAAATGGAAACTTGGAGCAATGGCTGCATGGTAATGTAGGACCATTTAGCCCCTTGACATGGGATATTCGAATGAAGATTGCCATTGGAACTGCGAAAGGGCTAAGCTATTTGCATGAAGGCTTAGAACCCAAAGTTGTGCACCGAGATATAAAATCTAGCAACATTCTTTTGGACAAAAACTGGAATGCCAAAGTTTCAGATTTTGGACTTGCCAAGCTCTTAGGATCCGAGAAAACCCATGTAACCACACGTGTAATGGGAACATTTGGATATGTTTCGCCTGAGTACGCAAGCACGGGTATGCTTAATGAGCGTAGCGATGTTTATAGTTTTGGAGTTCTACTCATGGAAATAATCACAGGAAGAACGCCTATTGATTATTCAAAACCACCCGGAGAGATGAATTTGGTTGATTGGTTTAAGGGAAAGGTAGCCAGTCGCTGCAGTGACGAACTCGTTGATCCTTTGATTGAGATTCCACCTTGTCCAAGATCTCTGAAGCGGGTTTTACTGATTTGCCTACGCTGTATAGATTTGGATGTGATCAAGCGACCGAAAATGGGTCAAATTGTTCATATGCTTGAGTCAGATGATTTCCCCTTTCGTTCTGAGCTACGTACAATTAGGGACAAAGATTCTGCGCCTTCTCAAGCAGATGTTTCCATCAAAGTTCCATATCAAAGAAAGCTTGCAGAACCTGCGGAAAAATCAACACATAGATGA 1380 0.4304 MSESTATSTSLMSLKVLILAGIFLIIVIIIVLFIFLCFRSNRTSKKRKLLPKLHSSGTTPLVSKEIAVVKEIDLTRSTEQTRIQIFDDGDVVDEKKEAEIKVEIGGVRKSDVSGGGVHMEEDPNIGWGRWYSLKEVEMATRGFSEGNVIGEGGYGVVYRGVLQDSVVAVKNLHNNKGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAEGARRMLVYEYVENGNLEQWLHGNVGPFSPLTWDIRMKIAIGTAKGLSYLHEGLEPKVVHRDIKSSNILLDKNWNAKVSDFGLAKLLGSEKTHVTTRVMGTFGYVSPEYASTGMLNERSDVYSFGVLLMEIITGRTPIDYSKPPGEMNLVDWFKGKVASRCSDELVDPLIEIPPCPRSLKRVLLICLRCIDLDVIKRPKMGQIVHMLESDDFPFRSELRTIRDKDSAPSQADVSIKVPYQRKLAEPAEKSTHR* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2298 459 SMART serkin_6 143 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2298 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Tpr3g2298 459 Gene3D Transferase(Phosphotransferase) domain 1 218 425 - -
Tpr3g2298 459 SUPERFAMILY Protein kinase-like (PK-like) 126 414 IPR011009 -
Tpr3g2298 459 ProSiteProfiles Protein kinase domain profile. 143 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2298 459 Pfam Protein tyrosine and serine/threonine kinase 146 413 IPR001245 GO:0004672|GO:0006468
Tpr3g2298 459 ProSitePatterns Protein kinases ATP-binding region signature. 149 170 IPR017441 GO:0005524
Tpr3g2298 459 MobiDBLite consensus disorder prediction 429 459 - -
Tpr3g2298 459 CDD STKc_IRAK 149 414 - -
Tpr3g2298 459 Gene3D Phosphorylase Kinase; domain 1 117 217 - -
Tpr3g2298 459 PANTHER OS01G0323000 PROTEIN 5 459 - -
Tpr3g2298 459 PANTHER RECEPTOR-LIKE KINASE 5 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2298 Tpr-Chr3 21749974 21753315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2298 130 415 Trihelix Transcription Factor Family AT5G38560 48.464 8.83e-90 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Tpr3g2298 PK_Tyr_Ser-Thr 3.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2298 - - gmx:100305442 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2298 3 21749974 21753315 Tpr3g2298 3 21749974 21753315 ECH