Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2265 ATGATTAGATATAAATATTGTTATTTTGTGAGCAGAAAGCAAAGCAAAAGGGAAGAGTGTGGTAAACCTTCTCCTTCACTTTTCTCGTCGGAATTTTCGCTATTCCCTTTTTCCGATCATCCTATTCGATCCCAATCACCAAACCCTACTTTTTCTATTCTATTCCAAATGGAAGATTACGGTAGCAGCGACGACGATTATCACTTCTCCGATCAAGAAGATTCCGATGTCGAACTAATCGAAAACGACGATCGCAATTTTGAATTAGTCTCTTCTAAGACTCCTACTGCTCAGGTGATTACGAAGGAATCACTGATAGCTGCACAGAAGGAGGATTTGCGCAGAGTGATGGACATGCTTTCTGTGAAACAACAACATGCACGTACGCTGCTTATTTATCATCGTTGGGATGTGGAAAATTTGTTTGAAGTTTATGTAGAAAGAGGGAAGGCGTTCATGTTTGCTCAGGCTGGTGTTAGTGTGGATGAATGTCGTGACTCTGACTCATCGGTTAGTGCGTTAGTAATGTGTGAAATCTGTATGGACGATGTTCCTAGTGATGAAGCAACAAGAATGGACTGTGGTCACTGCTTTTGCAACACCTGTTGGACACAACATTTTTTTGTCAAGATAAATGAGGGTCAAAGTAAACGCATCAGATGCATGGCTCACAAATGTAATTCCATTTGTGATGAAGCTGTCGTAAGAACCCTACTCAGTAGAGAGCACCCTGATATGGCAGAGAAATATGAACGGTTTCTTCTTGAATCTTACATCGAAGACAATAAAAGAGTTAAATGGTGTCCAAGCACACCACATTGTGGGAATGCAATTCGTGCTGTGGGTGATGACTTGTGTGAGGTAGAATGTTCATGCGGTGAACAATTTTGTTTTAATTGCTTGTCAGAAGCGCACTCCCCCTGTTCATGTTTAATGTGGAAACTTTGGGAAAAGAAGTGCCGGGATGAATCCGAAACTGTTAATTGGATAACAGTTCATACAAAGCCTTGTCCAAAGTGCCACAAACCGGTGGAGAAGAATGGTGGCTGTAATTTGGTCGCCTGTATTTGCGGTCAAGCATTTTGTTGGTTGTGTGGTGGAGCTACCGGCCGGGAGCATACCTGGTCAAGTATAGCAGGTCATAGCTGTGGTCGCTACAAAGAGCAAGAGAAATCAGCTGAGCGGGCCAAGAGGGATCTCTATAGGTACATGCATTATCATAACCGATATAAAGCTCACACAGACTCCTTTAAGCTTGAAAGTAAACTGAAAGGTCTCATACAAGGGAAGATTACTGCTTCGGAAGAAAAAAGTGAACTCAGAGATTATAGCTGGGTGCATAATGGACTGTCCAAGCTTTTCAGATCTAGGCGTGTCCTTTCACATTCATATGCATTTGCATTTTATATGTTTGGAGATGAGATTTTTAAAGAAGAAATGTCCGATGCTGAAAGGGAAATAAAACAGAACTTATTTGAGGATCAGCAGCAGCAGTTTGAAGCAAATGTTGAAAGACTATCTAAGATTTTGGAGGAGCCTTTCGAAACCTTTGATGATGATGCTAAGGTCATGGCGATAAGGATGGAGATAATAAATCTGTCAACACTTATTGATGGTCTTTGTAAAAAAATGTATGAGTGCATTGAGAATGATTTATTGGGATCTATTAGTCTTGGTAGTATCCACAGTATAGCACCATATAAATCAAAGGGCATAGAGAGGGCTTCAGAGCTTCCAGTTTGTTTTAGCAATAAAGCCAACGATACAGGTGTAACAGCAGAGCTTAATCAGTCAGAAGAGAGTGGATGTTCTTCTCGTAAGCGAGCCCGAAAAGACGGTGGCTTTTTTGATCTAAACTTGCCAGCTGAGTTTGTAGACAGAAATTGA 1887 0.4112 MIRYKYCYFVSRKQSKREECGKPSPSLFSSEFSLFPFSDHPIRSQSPNPTFSILFQMEDYGSSDDDYHFSDQEDSDVELIENDDRNFELVSSKTPTAQVITKESLIAAQKEDLRRVMDMLSVKQQHARTLLIYHRWDVENLFEVYVERGKAFMFAQAGVSVDECRDSDSSVSALVMCEICMDDVPSDEATRMDCGHCFCNTCWTQHFFVKINEGQSKRIRCMAHKCNSICDEAVVRTLLSREHPDMAEKYERFLLESYIEDNKRVKWCPSTPHCGNAIRAVGDDLCEVECSCGEQFCFNCLSEAHSPCSCLMWKLWEKKCRDESETVNWITVHTKPCPKCHKPVEKNGGCNLVACICGQAFCWLCGGATGREHTWSSIAGHSCGRYKEQEKSAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKGLIQGKITASEEKSELRDYSWVHNGLSKLFRSRRVLSHSYAFAFYMFGDEIFKEEMSDAEREIKQNLFEDQQQQFEANVERLSKILEEPFETFDDDAKVMAIRMEIINLSTLIDGLCKKMYECIENDLLGSISLGSIHSIAPYKSKGIERASELPVCFSNKANDTGVTAELNQSEESGCSSRKRARKDGGFFDLNLPAEFVDRN* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2265 628 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 171 261 IPR013083 -
Tpr3g2265 628 Pfam Ariadne domain 387 628 IPR045840 -
Tpr3g2265 628 SUPERFAMILY RING/U-box 317 375 - -
Tpr3g2265 628 ProSiteProfiles Zinc finger RING-type profile. 177 225 IPR001841 -
Tpr3g2265 628 Pfam IBR domain, a half RING-finger domain 248 310 IPR002867 -
Tpr3g2265 628 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 61 571 IPR031127 GO:0004842|GO:0016567
Tpr3g2265 628 Gene3D - 306 553 - -
Tpr3g2265 628 SMART ibrneu5 318 383 IPR002867 -
Tpr3g2265 628 SMART ibrneu5 248 310 IPR002867 -
Tpr3g2265 628 ProSiteProfiles TRIAD supradomain profile. 173 387 IPR044066 -
Tpr3g2265 628 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ARI2-RELATED 61 571 - -
Tpr3g2265 628 SUPERFAMILY RING/U-box 248 316 - -
Tpr3g2265 628 SUPERFAMILY RING/U-box 174 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2265 Tpr-Chr3 21293859 21298505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2265 117 606 ARIADNE family AT2G16090 68.485 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2265 K11968 - gmx:100783343 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2265 3 21293859 21298505 Tpr3g2265 3 21293859 21298505 ECH