Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2249 ATGGAGATTCTCCACTCCGACGAAACCTCACCAAAACCTTCAATTCCAACCCCAAACGACGATTCCACGGACCCTGATGAAGGTGTCTCTCTCGATGTATCGGGAAAGAATCTAGAGTTTCCTGTGGTTGAGAATTCTGAAGAAGATGCTATTGAGAGTTTGTATATGTACAAGAATGTTTACAGTTTGATTCCGAAGACTGTGGGTGGTTTGGTAAGATTGAAAACGCTGAAATTCTTTGGAAACGAGATTAATTTATTTGCGCCTGAGTTTGGGAACATGACGAGATTAGAGAGGTTGCAGATGAAAGTATCTTCTCCTGGTATTGGTGGGTTGCCGTTCCATAAATTGAAGGGTTTGAAAGAACTTGAGCTTTCTAAAGGTCCTTCTAGACCTTCTGCTTTTCCTATATTGGCTGAGATTGCTGCTCTTAAGTGTTTGACAAAGCTTTGTATTTGTCACTTCTCTATAAGATACCTTCCTCCGGAAATTGGGTGCTTAACGAATCTGGAATATCTTGATCTTTCATTCAATAAAATGAAGACATTGCCCTTGGAGATTAGTTCTTTGAAAGTATTGATAACCATGAAAGTTGCGAATAATAAGTTGGTGGAACTACCACCGGCCATGAACTCACTGTCAAGGTTGGAGAGTTTGGACCTGTCAAATAATAGGTTGACTTCATTAGGGCCTCTTCAACTTAGCTCAATGCATAGACTTCAGAACTTAAATCTTCAGTACAACAAGCTACCCAACATTTTTCAAATTCCTTCATGGATATGCTGTAATATGGAAGGAAATGATGGAGATGGATGCAAAGACAACTGTAGCAGCACTTCTGTTGAAATGGATGTCTACGAAAGCAATTTACAGGAAAATGAGGAAACATTTTCTCATGGAACTCAGAACACCTCATCAAGCATATTAACAAACTCCTCATCTAACAATAGATGTATTGCAGCCTTGAAGTCGGGTAGACGGTGGAAGCGACGACACACTAAACAGCAGAAAACTCGTCAAGAGCAGAAAGCTCGTCAAGAGCGGTTGAATAACAGCAGGAAGTGGAAAGGTGTAGATCATGACCAGTTGTTAAGCAAGAAGATCCACAGAATTTCTGAACCAGAAAGTCTGGATACGCTTGTTTCTGAAAATGACATCGGATATGTATCAGACAATGGGAGCCTGAATGACAACAATGAAAAAATATTCTCCAAAGAAGCAGTCCACAACAATTTAATTGATAATGTCAATAACGATAGTCTGGATGATAATGTCAATAACGATAGTCTGGATGATAATGTCAATAACGATAGTCTGGATGACAATCATAAAAAAATATTCTCCGAAGAAGCAGTGGACAGCAATTTAATTGATAATGTCAAGGATGATGAGGTAATCATTGAAAATCAGTTTTCTCAAGAAGATTGCTGCAGTGCGGAAGGTAAAGATGAAAGAGATGCATCCTCATTCTCCTTAGACAATGTGCGAAGTGAACAAGGTGGAGCATCTTGTTCAGATTTTTCAAAGTGTAATTTTAAATCAAAGAGGCATTCAGATCGAGATCTCGATAATCCTAAACCCTGCAAGTCTAGAAAACCAATTGGTGATGGCTCATTATTGTCTTCCAAGTACAGTAAAATATCATTTTGTGGTACCGAGGACCATCTATCAGACGGCTTTTATGATGCGGGACGTGATCGACCCTTTATGCCTCTTGATAGTTATGAGCAAAATCAGTGTCTTGCATCTCGTGAAGTCATCCTGTTAGACAGAAAAAGGGATGAAGAATTGGATGCCATCATGCTATCTGCTCAGGCAATGGTCTCTAATTTGAAGCGGTTAAATGGTTTAAACAAACCTGGGAGCCAGGGTGAAGTTGATAACTTGCAGACAGCATCACTGCTTGCACTCTTTGTATCTGATCATTTTGGCGGAAGTGATAGAACTGCTATTATAGAAAAGACACGCAAATCTGTTTCTGGTTCAAACTATAATAAGCCTTTTGTCTGTACATGTTCGGCCGGAAGTAGCACAAGTATAAATGTTGCAAACGAACCCGCTGTGAACACCATAGAAGATATTGGTCTTTCTAAGATCTCTGAAAAAAATCTCGATTCTATAAAAAAAAGACGAAAGTCAATCATTGTTCCACTTGGCTCTGTTCAGTATGGTGTATGTAGGCATAGAGCTCTGCTTTTTAAGTATTTATGTGATCACATGGAGCCACCTGTACCTTGTGAGCTTGTTAGGGGTTACATGGATTTTTCACCACATGCCTGGAATATCATTCTGGTAAAGAGGGGTGTTACATGGGTTCGAATGCTTGTTGATGCTTGCCGACCTCTTGATATTAGAGAAGAGAAAGATCCAGAATTTTTCTGCAGGTATATACCTCTTAGACGAACCCAAATTCCTCTTTCAACTAGCAGTCTTCCTAGTCCTGATAATTCCTTTCCATCTCTCTCTAACTGTGATGAACTCGAGAAAAAGGCTTCAACTACATTAGTTCGGTGCAAATATGGATCAGTTGAGGCGGCAGTGAAGGTGCGTACTTTGGAAGTACAAGGGAGTTCAGCAGACCAAATAAAAAACTTTGAATATAATTCTTTGGGAGAAATCAGAATTCTTGGTGCTTTTAAACACCCCTGCATAGTGGAAATGTATGGACACCAAATATCGTGCAAATGGACTATCTCTGCTGATGGCACTCCTGAGAATTGCGTGTTGAGATCTGCAATTTTTATGGAATATGTGGAAGCGGGTTCGTTAAAAACCTATCTAAAGGAGTTGTCAGAAGCTGGTGAAAAGCATGTTCCTGTGGAGTTAGCCTTGTATATTGCCAAAGATGTCTCATGTGCTTTGTCGGAGTTGCACTCGAAGCACATAATTCACCGTGACATAAAAAGTGAAAACATTCTGTTTGATTGTGATAGGAAAAGAGATGATGGAACTCCCACTGTGAAACTCTGTGATTTTGATAGTGCAGTGCCGCTAAGATCACCTTTACATGCATGCTGTATTGCTCATGTGGGAACACCTCCTCCTTGTGTGTGTGTTGGAACACCTCGATGGATGGCTCCGGAGGTCGTGCGGACTATGTATAAAAAGAACACTTATGGATTGGAAGCGGATATTTGGTCATTTGGGTGTTTACTTCTAGAGATGCTAACTTTGCAAGTTCCATATTCTGGATTCCCCGATTTACATGTCCATGATAGTCTGCAGATGGGTAAGCGACCACAATTAACTGATGAGATGGAGGCATTGAGTTCAATGGGTGAACCCACAATGATTCAATCTGGTGAAGAGCTGGAAAAATCAGATGCAGAGACAGACACACTGAAGTTCCTTGTTGATTTGTTTCATAGGTGTGTGGAAGAAAATCCAAATGAACGACCTACAGCTGAAGAAATCTATGAAATGCTGCTTGAACACACAAGTCGCATACAAGTTCAAAATGCCGGGGAGATTTAG 3474 0.4033 MEILHSDETSPKPSIPTPNDDSTDPDEGVSLDVSGKNLEFPVVENSEEDAIESLYMYKNVYSLIPKTVGGLVRLKTLKFFGNEINLFAPEFGNMTRLERLQMKVSSPGIGGLPFHKLKGLKELELSKGPSRPSAFPILAEIAALKCLTKLCICHFSIRYLPPEIGCLTNLEYLDLSFNKMKTLPLEISSLKVLITMKVANNKLVELPPAMNSLSRLESLDLSNNRLTSLGPLQLSSMHRLQNLNLQYNKLPNIFQIPSWICCNMEGNDGDGCKDNCSSTSVEMDVYESNLQENEETFSHGTQNTSSSILTNSSSNNRCIAALKSGRRWKRRHTKQQKTRQEQKARQERLNNSRKWKGVDHDQLLSKKIHRISEPESLDTLVSENDIGYVSDNGSLNDNNEKIFSKEAVHNNLIDNVNNDSLDDNVNNDSLDDNVNNDSLDDNHKKIFSEEAVDSNLIDNVKDDEVIIENQFSQEDCCSAEGKDERDASSFSLDNVRSEQGGASCSDFSKCNFKSKRHSDRDLDNPKPCKSRKPIGDGSLLSSKYSKISFCGTEDHLSDGFYDAGRDRPFMPLDSYEQNQCLASREVILLDRKRDEELDAIMLSAQAMVSNLKRLNGLNKPGSQGEVDNLQTASLLALFVSDHFGGSDRTAIIEKTRKSVSGSNYNKPFVCTCSAGSSTSINVANEPAVNTIEDIGLSKISEKNLDSIKKRRKSIIVPLGSVQYGVCRHRALLFKYLCDHMEPPVPCELVRGYMDFSPHAWNIILVKRGVTWVRMLVDACRPLDIREEKDPEFFCRYIPLRRTQIPLSTSSLPSPDNSFPSLSNCDELEKKASTTLVRCKYGSVEAAVKVRTLEVQGSSADQIKNFEYNSLGEIRILGAFKHPCIVEMYGHQISCKWTISADGTPENCVLRSAIFMEYVEAGSLKTYLKELSEAGEKHVPVELALYIAKDVSCALSELHSKHIIHRDIKSENILFDCDRKRDDGTPTVKLCDFDSAVPLRSPLHACCIAHVGTPPPCVCVGTPRWMAPEVVRTMYKKNTYGLEADIWSFGCLLLEMLTLQVPYSGFPDLHVHDSLQMGKRPQLTDEMEALSSMGEPTMIQSGEELEKSDAETDTLKFLVDLFHRCVEENPNERPTAEEIYEMLLEHTSRIQVQNAGEI* 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2249 1157 MobiDBLite consensus disorder prediction 339 356 - -
Tpr3g2249 1157 Gene3D Ribonuclease Inhibitor 28 276 IPR032675 -
Tpr3g2249 1157 Gene3D Transferase(Phosphotransferase) domain 1 820 1155 - -
Tpr3g2249 1157 MobiDBLite consensus disorder prediction 1 27 - -
Tpr3g2249 1157 MobiDBLite consensus disorder prediction 10 24 - -
Tpr3g2249 1157 ProSitePatterns Serine/Threonine protein kinases active-site signature. 962 974 IPR008271 GO:0004672|GO:0006468
Tpr3g2249 1157 Pfam Leucine rich repeat 195 250 IPR001611 GO:0005515
Tpr3g2249 1157 MobiDBLite consensus disorder prediction 325 356 - -
Tpr3g2249 1157 SUPERFAMILY Protein kinase-like (PK-like) 822 1142 IPR011009 -
Tpr3g2249 1157 ProSiteProfiles Leucine-rich repeat profile. 169 191 IPR001611 GO:0005515
Tpr3g2249 1157 ProSiteProfiles Leucine-rich repeat profile. 215 236 IPR001611 GO:0005515
Tpr3g2249 1157 Pfam Ethylene-responsive protein kinase Le-CTR1 697 777 - -
Tpr3g2249 1157 ProSiteProfiles Protein kinase domain profile. 821 1148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2249 1157 PANTHER BNAC08G43810D PROTEIN 52 1146 - -
Tpr3g2249 1157 Pfam Protein kinase domain 859 1140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2249 1157 PRINTS Leucine-rich repeat signature 170 183 - -
Tpr3g2249 1157 PRINTS Leucine-rich repeat signature 213 226 - -
Tpr3g2249 1157 SMART serkin_6 825 1149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2249 1157 SUPERFAMILY RNI-like 51 265 - -
Tpr3g2249 1157 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 52 1146 - -
Tpr3g2249 1157 SMART LRR_typ_2 167 190 IPR003591 -
Tpr3g2249 1157 SMART LRR_typ_2 213 236 IPR003591 -
Tpr3g2249 1157 SMART LRR_typ_2 237 263 IPR003591 -
Tpr3g2249 1157 SMART LRR_typ_2 71 93 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2249 Tpr-Chr3 21105032 21113965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2249 872 1146 MAP Kinase Kinase Kinase AT1G63700 28.727 6.87e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Tpr3g2249 Pkinase 1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2249 - - mtr:MTR_4g068740 1941.78