Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2242 ATGGCATCATCATCACCATATGAACCCTCCTCCACCCTCCCTCTCAAAGAAATCCCAGGAAGCTACGGCCTCCCGGTCATCGGAGCCCTACACGACAGACATGACTATTTCTACAACCAAGGTCGCGACAAATACTTCGCAACCAGAGTCGAAAAATACAACTCAACCGTCCTAAGACTCAACATGCCACCTGGTGGTTTCATCGCACCAGACCCAAAAGTCATCGCTCTTCTTGACGGCGTCTCCTTCCCCATCCTTTTCGACAACGCTAAAGTTGAAAAAAAGGATGTCTTGGACGGCACTTTCATGCCGTCCACTGATTTCTTCGGTGGTTACCGTACCTGTGCTTTTCTAGACACAACAGAACCTTCTCATCCCCTTCTCAAACGCTTCATCTTCCATATCCTATCCACCAAACAAGACACTTTCATTGGTCTTTTTCAAGAAAACCTCTCCAAACACTTCACCGAACTTGACGAAGAACTCGCCGGAAAACATAATAAAGCAAATTTCAACTCCTCAATCGGATCCACCACTTTTAACTTCCTCTTCAAACTCATAACAGATAAATCCCCAACCGAAACAAAAATCGGTGACTCCGGTCCAACTCTTGTTCAAACATGGCTTGCAGCTCAGCTTGCTCCGTTAGCCACCGCTGGTCTTCCAAAAATCTTTAACTACATTGAAGATATTATCATCAGAACTATTCCGATCCCGGCATGGACAGTGAAATCAAGCTACAATAAACTCTATGAAGGTTTATGGGAAGCAGGAACAACTGTGTTAGATGAAGCTGAAAAATTGGGTATATCAAGAGAAGAAGCTTGTCACAATCTTGTTTTCACTTTAGGGTTCAACGCTTTTGGTGGGTTAACGAATCAGTTTCCGATTCTGATTAAATGGGTCGGGTTGGGTGGTGAAGAGTTGCATAAGAAACTTGCTGATGAAATCAGGACCGTTGTTAAAGAACAAGGTGGTGTTAGTTTTAGTTCATTGGATAAGTTGACTTTGACTAAATCAACGGTGTATGAAGCTTTGAGAATTGAACCAGCTGTACCGTATCAATACGCTAGAGCCAGAGAGGATCTGGTGGTATCGAGTCATGATGCGTCTTTTGAGATTAAGAAAGGTGAGATGATCTTTGGATATCAACCGTTTGCTACTAAAGATCCAAAGATTTTTGAGAATCCTGAGGAATTTGTTGCAGAAAGGTTTATTGGTGATGGAGAAAAGTTATTGAAACACGTGTTTTGGTCCAATGGACGGGAGACCGATAAAGCTACACCAGATAATAAAATATGTCCGGCGAAGAATCTGGTGGTGCTCTTGTGTAGATTGTATTTGGTGGAATTCTTCTTGAAATATGATACATTTACCTTTGATTTTAAACCGTCTGTTTTGGGTCCCACTATAACTATCAAGTCACTCACTAAAGCCTCCTCCACCGTCTGA 1452 0.4263 MASSSPYEPSSTLPLKEIPGSYGLPVIGALHDRHDYFYNQGRDKYFATRVEKYNSTVLRLNMPPGGFIAPDPKVIALLDGVSFPILFDNAKVEKKDVLDGTFMPSTDFFGGYRTCAFLDTTEPSHPLLKRFIFHILSTKQDTFIGLFQENLSKHFTELDEELAGKHNKANFNSSIGSTTFNFLFKLITDKSPTETKIGDSGPTLVQTWLAAQLAPLATAGLPKIFNYIEDIIIRTIPIPAWTVKSSYNKLYEGLWEAGTTVLDEAEKLGISREEACHNLVFTLGFNAFGGLTNQFPILIKWVGLGGEELHKKLADEIRTVVKEQGGVSFSSLDKLTLTKSTVYEALRIEPAVPYQYARAREDLVVSSHDASFEIKKGEMIFGYQPFATKDPKIFENPEEFVAERFIGDGEKLLKHVFWSNGRETDKATPDNKICPAKNLVVLLCRLYLVEFFLKYDTFTFDFKPSVLGPTITIKSLTKASSTV* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2242 483 PANTHER FATTY ACID HYDROPEROXIDE LYASE 9 480 - -
Tpr3g2242 483 PRINTS E-class P450 group IV signature 335 351 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2242 483 PRINTS E-class P450 group IV signature 372 386 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2242 483 PRINTS E-class P450 group IV signature 388 406 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2242 483 SUPERFAMILY Cytochrome P450 13 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2242 483 PANTHER CYTOCHROME P450 26 9 480 - -
Tpr3g2242 483 Pfam Cytochrome P450 308 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g2242 483 Gene3D Cytochrome P450 9 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2242 Tpr-Chr3 21047058 21048960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2242 10 480 Cytochrome P450 AT5G42650 49.471 7.16e-164 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2242 K01723 - gmx:100810890 734.561