Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2240 ATGGCGGGAAAACGAGAGGTTGTGCTAGGTATCTGTGCCCCGAGAATTGTTGAGGTTCCGCTTGATAAACATGTTGCATATGAGATTGATACATCGGCTCATTTTTACACTGATATGGCAACCCCTGACCGAGATGAGTTGATTAGATGGACTCGGGCCATTGCCTTAAAGTTAAAGTTTGCGATTGTAATTGGCAAATCCGACAACGGCAACGATATGAGGAAGCAGTATTTCAGGTTGGATTGCGAGCGGGGAGGCCGGTACGTGTCAACAAATAAGAAGCTAAAATCTGATCAGACAGGCACGAGGAAATGCGGCTGTCTATTTCGTCTTCGTGGTTATTATCATGCCGATAAAACATGGCATTTGACCGTTGTAAACGGCAAACATAACCACGAGTTGGACAAGGCAGTTGAAGGCCATCTCATTGTCGGTCGTCTCAAACCGGAAGAAAGGCAATGTATGGAGGAAATGTCAAGGAATTTGGTTCCGCCTAAGAATATAATGTCCACATTGAAAGAGAGGGATCCAAACAACAAGACAACGGCAAAGCAACTCTACAATTTAAGTTATCGATTAAAACTTAAAATGAGGGCATCAATGACTGAAATGCAACACCTCTCCAAAAGACTTGACGAGAACGGGTATTATTTCAAACATAGAACGGTTGTTGCAGACGGATTCGAACATGTTCAAGACATTTTCTTTGCACATCCTAGATCTATAAGCTTGTTCAATTCTTTTTCTACTGTGCTTTTGATGGATTAG 768 0.4245 MAGKREVVLGICAPRIVEVPLDKHVAYEIDTSAHFYTDMATPDRDELIRWTRAIALKLKFAIVIGKSDNGNDMRKQYFRLDCERGGRYVSTNKKLKSDQTGTRKCGCLFRLRGYYHADKTWHLTVVNGKHNHELDKAVEGHLIVGRLKPEERQCMEEMSRNLVPPKNIMSTLKERDPNNKTTAKQLYNLSYRLKLKMRASMTEMQHLSKRLDENGYYFKHRTVVADGFEHVQDIFFAHPRSISLFNSFSTVLLMD* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2240 255 Pfam Transcription factor AFT 86 134 IPR014842 GO:0000981|GO:0036086
Tpr3g2240 255 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 78 255 IPR031052 GO:0006355
Tpr3g2240 255 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 78 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2240 Tpr-Chr3 21020883 21021650 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr3g2240 AFT 0.00018 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2240 - - mtr:MTR_1g099140 181.03