Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2224 ATGCCTAGTATGGCTTCCCCTCTCCACCTTCCACTTTATTCTACTTGTGGTAAAATTCCTTCTTTTACTGCTCCTCAAGCCATTTCTATTAGAAAATTTGTTCTTAAAGTTAAGTGCTCAGAAACAAGGGAATGCACTGCTAATGCTAATGATAATGCTGTGTTTAATACCGAGTCACGTAGAGACTTTCTTGGATTAGCATTAGGAGTCTCTACTACACTCTTCATCCATTCATTTGATGCTGCCAATGGAGCTGGTTTGCCACCAGAAGAAAAACCAAAATTATGCGACGACACTTGTGAGAAAGAGCTTGAAAATGTACCTATTGTAACTACTGAATCAGGTTTGCAATACAAGGATATTAAAGTTGGGCAAGGCCCTAGTCCACCAGTTGGATTTCAGGTGGCTGCTAATTATGTTGCAATGGTTCCATCTGGACAAATATTTGATAGTTCATTGGAGAAAGGCCAGCTTTACATTTTTCGTGTTGGATCGGGTCAGGTGATAAAAGGACTTGATGAAGGTCTTTTGAGCATGAAAGTAGGAGGAAAACGTCGGCTGTACATACCTGGACCATTGGCATTCCCAAAAGGACTTAATTCTGCTCCAGGAAGACCAAGAGTGGCTCCAAACAGTCCGGTAGTATTTGATGTAAGTTTGGAATATGTACCAGGACTTGAAGTGGATGATGAGGAAAAATTTGGTTGTCGATTCAACCTTGATTGTACACAGTCAACCTAA 741 0.4076 MPSMASPLHLPLYSTCGKIPSFTAPQAISIRKFVLKVKCSETRECTANANDNAVFNTESRRDFLGLALGVSTTLFIHSFDAANGAGLPPEEKPKLCDDTCEKELENVPIVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMVPSGQIFDSSLEKGQLYIFRVGSGQVIKGLDEGLLSMKVGGKRRLYIPGPLAFPKGLNSAPGRPRVAPNSPVVFDVSLEYVPGLEVDDEEKFGCRFNLDCTQST* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2224 246 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 9 231 - -
Tpr3g2224 246 Gene3D - 91 221 IPR046357 GO:0003755
Tpr3g2224 246 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-3, CHLOROPLASTIC 9 231 - -
Tpr3g2224 246 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 132 220 IPR001179 GO:0003755
Tpr3g2224 246 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 132 224 IPR001179 GO:0003755
Tpr3g2224 246 SUPERFAMILY FKBP-like 97 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2224 Tpr-Chr3 20849972 20853036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2224 113 220 Calmodulin-binding Proteins AT3G25230 36.697 1.96e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2224 K01802 - gmx:100784939 365.54