Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2220 ATGAACATGGAAGATCAATTTTCCTCAAAGGACAATGGAATAAGCTTTTGGACACCATTGGATAATGGAATGAAAAGTTCAATAACTTCAGATGACATGTTTAACAATATCTCTGAGCTTATGAACTTCGATAACTATGCCGGTTGGTGCAACGGTTCATCATCATTAATTGATCAAACTCTAACTAGTGACCTTTCATCATTTGCATATTCACCACATGATGGATTGAGTTTAGTTGAACAAATTAATGGTCCATTTTTTATGACAGATATTGGTGGAAATTATAGCTCCACCAGTTATGAGGAAAAAGTACTTTTACAACAAATGGAAACACAATTTGCTTTCTTAGATAATGCAAATGAAACAAATAATAATAATTTAGATTCACAATTTGATATGTGCAATTACGTAATGTCGAAATCGCCTAGTTGGTCACTTGATGAGAGAATGATGAGTGCTTTATCCTTCTTTAAAGAATCAGCTGGTGGAGGAATATTAGCACAATTTTGGGTACCTATAAAGTATGGTGATGAAATTGTTTTAACCACAAGTAATCAACCATATTTACTAGACCAAAAGCTTGCAGGTTATCGCGAAGTGTCGAGGTCGTTTACATTTTCTGCAGAAATAAAAATGGGAGCTTGTTGTCCTGGACTTCCGGGCCGCGTGTTTATTTCGCATGTTCCTGAATGGACATCTAATGTTGGTTACTATCATAAATCTGAGTACTTAAGATTAGACCATGCAATTAGTCACGAGGTTCGCGGATCGATTGCTCTTCCAATATCTGATATGAACTCTGAAGTTTCATGTAGTGCTGTGCTAGAACTTGTTACTACAAAGGAAAAGCCTAATTTTGATAAAGAATTAGAATATGTTTCTCATGCACTTCAGCGTATGAATTTAAGGACTATTACCCCTCCACGACTTCTTCCACAGTGTGTATCAAATAACAAAAGAGCTGCATTAGCAGAGATAGTTGATGTGTTAAGAGCTGTTTGTCATGCACATAGATTGCCACTAGCACTGACATGGATTCCATGTTATTATAGTGAGGGAAAAGGCGAAGAATCTGAGAGATTACGGATTAAAGAAGGCCGTACAACAAATTCTGATGAAAAATGTGTGCTATGTATTGAAGAATCAGCTTGTTATATCAACGATAAAATGGTAGAAGGATTTGTTCATGCATGTTCTGAACATCACCTCGAGGAAGGACAAGGTATATCTGGGAAAGCTCTTCAATCAAATCATCCATTCTTCTATACCGATGTGAAAGCTTATGATATTAGTGAATATCCGCTTGTTCATCATGCACGAAAATATAACTTGAATGCTGCTGTTGCAACTAGGTTAAGGAGTACTTATACTAATGATGATGATTATGTGTTAGAATTCTTTCTTCCTATCGATATGATAGGGAGTTCAGAACAACAGCTTTTATTAGACAATTTGTCCGATACTATGAGGCGAATTTGTAAGAGTTTGAGGACAGTTTCAGAAGGCGAATTACGAGGGATAGAAGTTTCTCAAGATGGTTTTCCAAAGGAAAATATTTCAGGGTTTTTTCCAATGTCTAAGGGAAACTCTCAGATAGCATTTAGCACTGGTGATCCTGATTTATTCCAGATGCCATTGATGGCAGCTAATAATGGAATCCAAGGTTCACATAGTCAGGTAACAAGTGAATCGAGAAAACAGGCTGAGAAAAGGAGAAATGCAGTGGAGAAGAATGTTAGCTTGAGTGTTCTCCAACAATACTTCTCTGGTAGTTTGAAGGATGCTGCGAAAAAAATTGGGGTTTGTCCGACAACTCTGAAGAGAATATGCAGGCAACATGGAATTTCAAGATGGCCATCGCGGAAGATAAATAAAGTGAATCGTTCATTGAAGAAAATACAAACTGTCCTTGATTCTGTCCAAGGAGTTGAAGGAGTGCTTAAGTTTGACCCTCACACTGGTGGATTTGTTGCAGGAGGATCAATCATTGAGCAAATTGGCACATGTAATAAAAATCTTATGTTCCCCGAGAAAAGCTCTGTAGAGAACTCGGCCATTAAGTTGGAGGATGATGGTGTTCTTATCTCAAATTCATGTGAGGGTGACTTGAAGAAAGATAATAATGCTTCTTCTGATGATTATATTCAAGACTCAACATCATGGCTTTGGACAAAGACTCATGAATGTCCTAAACAAAACTCTATAGATTCTGTTCTTGAAAAAGAGGAAGATCAATGTGGTTTGAACAATAGTAGTTTGCATGATATTGCCTCTAATAGTTCATTCTCATTGATAGAACTTGGTTTGGATGAAGGAAAAGGACTTGATGAACCTAACCATCCGACTTCTTCAAGCATGACAGATTCTTCCGATGCATCTGGATCAATGGTTCGTGGAAGTTCATCGGGCTCTCAAAGCATTGAGAACCATAAGAACTCAAAGATCAAATCAATTTGTGTTGATAGTGAATCGAAATTTGCCGTCAAAGCTACTTTTAGAGGCGATACTATTCGTTTCAAGTTTGATCCATGTTTAGGTTGTTTCCAACTATATGAAGAAGTTGCAACAAGGTTTAAATTACGGAATGGTTCATTCCAACTCAAGTATCTTGATGATGAAGAGGAATGGGTGTTGTTGGTGAATGACTCAGATTTGAAGGAATGTGTAGAAGTTTTGAGTGATAGTGGTACACATTGTGTGAAGTTACTTGTTCGCGATATACATGGCGATGGTAATAGTTGA 2742 0.3716 MNMEDQFSSKDNGISFWTPLDNGMKSSITSDDMFNNISELMNFDNYAGWCNGSSSLIDQTLTSDLSSFAYSPHDGLSLVEQINGPFFMTDIGGNYSSTSYEEKVLLQQMETQFAFLDNANETNNNNLDSQFDMCNYVMSKSPSWSLDERMMSALSFFKESAGGGILAQFWVPIKYGDEIVLTTSNQPYLLDQKLAGYREVSRSFTFSAEIKMGACCPGLPGRVFISHVPEWTSNVGYYHKSEYLRLDHAISHEVRGSIALPISDMNSEVSCSAVLELVTTKEKPNFDKELEYVSHALQRMNLRTITPPRLLPQCVSNNKRAALAEIVDVLRAVCHAHRLPLALTWIPCYYSEGKGEESERLRIKEGRTTNSDEKCVLCIEESACYINDKMVEGFVHACSEHHLEEGQGISGKALQSNHPFFYTDVKAYDISEYPLVHHARKYNLNAAVATRLRSTYTNDDDYVLEFFLPIDMIGSSEQQLLLDNLSDTMRRICKSLRTVSEGELRGIEVSQDGFPKENISGFFPMSKGNSQIAFSTGDPDLFQMPLMAANNGIQGSHSQVTSESRKQAEKRRNAVEKNVSLSVLQQYFSGSLKDAAKKIGVCPTTLKRICRQHGISRWPSRKINKVNRSLKKIQTVLDSVQGVEGVLKFDPHTGGFVAGGSIIEQIGTCNKNLMFPEKSSVENSAIKLEDDGVLISNSCEGDLKKDNNASSDDYIQDSTSWLWTKTHECPKQNSIDSVLEKEEDQCGLNNSSLHDIASNSSFSLIELGLDEGKGLDEPNHPTSSSMTDSSDASGSMVRGSSSGSQSIENHKNSKIKSICVDSESKFAVKATFRGDTIRFKFDPCLGCFQLYEEVATRFKLRNGSFQLKYLDDEEEWVLLVNDSDLKECVEVLSDSGTHCVKLLVRDIHGDGNS* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2220 913 Gene3D - 821 905 - -
Tpr3g2220 913 MobiDBLite consensus disorder prediction 778 809 - -
Tpr3g2220 913 Pfam PB1 domain 826 906 IPR000270 GO:0005515
Tpr3g2220 913 SUPERFAMILY CAD & PB1 domains 821 908 - -
Tpr3g2220 913 ProSiteProfiles RWP-RK domain profile. 565 646 IPR003035 -
Tpr3g2220 913 ProSiteProfiles PB1 domain profile. 825 907 IPR000270 GO:0005515
Tpr3g2220 913 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 17 907 - -
Tpr3g2220 913 Pfam RWP-RK domain 578 626 IPR003035 -
Tpr3g2220 913 SMART PB1_new 825 907 IPR000270 GO:0005515
Tpr3g2220 913 PANTHER PROTEIN NLP8 17 907 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2220 Tpr-Chr3 20804418 20810056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2220 3 907 NLP Transcription Factor Family AT2G43500 47.629 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Tpr3g2220 PB1 2.1e-16 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2220 - - aprc:113864503 1170.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4791 7 56000162 56007427 Tpr3g2220 3 20804418 20810056 PCT