Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2203 ATGGAGTTAGGGATTGATGGCTCTGTTAATTGCGATGCAGTAAGAGATGCTATCGATGCAGTAAGAGATGCTGTCATGGTTGAAGTCGGTAGCATACCTGATGAAAACATAGAAGAAGAAAGTTCTGCTGAACCAACTTACAAACAAGACCAAGATGATAACGTGACTCAAGATTCTTCTGCAGGAGCATTAACAATTCCCTCAGCAGTTCCCACACTACCGGACGGTTCTGCTGATGAGCCCTATGTGGGTCAGGAGTTCGAGTCGGAAGCAGCAGCACATGCCTTTTATAATGCATACGCAGCCGAGGTTGGATTCATCATACGCGTAAGCAAACTCTCACGATCAAGGCGTGACGGAACTGCTATTGGACGCGCTCTTGTTTGCAACAAAGAGGGTTACAGAATGCCTGATAAGCGCGAAAAGATCGTAAGACAAAGGGCAGAGACAAGGGTTGGTTGTAGGGCAATGATTATGATGAGGAAAATTAATTCTGGTAAATGGGTTATTACAAAGTTTGTAAAGGAGCACACACATCCCTTGAATCCCGGAAGTAATAGAAGGGATTGCATGTTTGAACAATATCCGTCTCAGAACGAACATGATAAAATCCGCGAATTATCTCAGCAGTTGGCAATAGAGAAGAAGCGATCAGTAACTTATAAAAGACAACTTGAAGTGATATTTGATTATATCGAGGAGCATAATGTGACCCTTTCACACAAAATACAGCACATAGTAGACAGTGTGAAGCAGATGGAAACCTAA 768 0.4284 MELGIDGSVNCDAVRDAIDAVRDAVMVEVGSIPDENIEEESSAEPTYKQDQDDNVTQDSSAGALTIPSAVPTLPDGSADEPYVGQEFESEAAAHAFYNAYAAEVGFIIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMIMMRKINSGKWVITKFVKEHTHPLNPGSNRRDCMFEQYPSQNEHDKIRELSQQLAIEKKRSVTYKRQLEVIFDYIEEHNVTLSHKIQHIVDSVKQMET* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2203 255 Pfam FAR1 DNA-binding domain 96 183 IPR004330 -
Tpr3g2203 255 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 20 255 - -
Tpr3g2203 255 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 20 255 - -
Tpr3g2203 255 MobiDBLite consensus disorder prediction 31 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2203 Tpr-Chr3 20641202 20646218 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr3g2203 FAR1 1.1e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2203 - - gmx:100806900 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4580 7 54275885 54279381 Tpr3g2203 3 20641202 20646218 PCT