Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2200 ATGGGGTTCTCAGCAAGACATTTTTCAATCTATGGTTTGAATATTCTATTTGAACTTGTGGTTTTAATATCATATTTTTGTTGTCAAGTTTATAGTCTTGGTTCAATGTCATCCATTGCAGTTTCATATGGTGAAAAAGGTTCAGTTTTTTGTGGTTTGAAATCAGATGGATCTCATACTGTAACATGTTATGGATCTAACTCAGCCATAATCTATGAAACACCAACACATTTCTCATTTCTTGGTTTAACAGCTGGTGATGGATTTGTCTGTGGTCTTCTAATGGATTCAAATCAACCTTACTGTTGGGGTAACAGTGGCTACATTGAAATGGGTGTGCCTCAACCTATGATTAAAAAAGCTCAGTACTTAGAAATTAGTGCTGGTGATTATCATGTATGTGGATTAAGAAAACCTTGGAAAAAAAATGTTTCTTTAGTTGATTGTTGGGGCTATAACATGACAAAAAGTTACATGTTTGATGGAATGATTCAATCGATCTCAGCTGGTTCTGTGTTTCACTGTGGATTGTTTTCTAACAATAGAAGTGTTTTCTGTTGGGGTGATGAGACTAGTAGCAAGGTTATTAGTTTGACGCCTTTGAAAATGAAGTTCAAAATGATTTCTGCTGGTGGATATCATGTTTGTGGAATCTTAGAAGGGGTAAATTCTAGAACTTTTTGTTGGGGGAGAAGTTTGGACATTGAGGAACAAATTTCAGTAACACATGCAGGTCAAGGAAATGTAGATTTAGCTCCAAATGATCCTATGATTTCTATAGTAGGAGGAAGGTTTCATGCTTGTGGCATAAAAAGCTCTGATAACGGAGTTATTTGTTGGGGGTTTATGATCAAATCAAGCACTTCAGCTCCTAGTGAGGTTAAGGTTTATGGGATTGCAGCTGGTGATTATTTTACTTGTGGGGTACTTGCTGGGAAAAAATCCCTTGTGCCTTTTTGTTGGGGTGTTGATTTCCCTACTTCTCTTCCTTTAGCCGTCTTGCCGGGAATATGCAAGCCTTTTCCATGTCCTCATGGTTTCTATGAATTTGATCAAAAGGGTCTTTGCAAGTTTCCAAATTCTGGTGTTTGCATGCCATGCAGTGGTGATTGTCCTATTGAAATGTATCAGAAAAGTGTATGCAATTTGGCTTCTGATAGAGTGTGTGAATATAACTGCTCTGCTTGTTCTTCACATGAATGTTTCTTACACTGCTCCTATTCATATTCTAATGTTGGCAATGAGAAGAAAAATGAGAAGTTTTGGGCTTTGCAGTTACCAGTGGTTATTGCAGAGATTGGTTTTGTACTTTTTATAGTTAGTATTGCATCATTAACCTCGGTTTTGTATGTTCGCCACAGGCTAAGAGATTGTGAGTGTTCAGCAAGATTAAAAAAGGCAAAGAAACTTAACCGAAGTTCTTCCCTTCAAAATGAGAATCAGCGCAAGATCCGTCCAGAAATGGAGGAGTTGCAGCTTAGGAAGGCTCAAAGATTCACCTATGAAGAACTTGAAACTGCAACAAGTGGATTCAAAGAAGAATCAATAGTAGGAAAAGGAAGTTTTTCTTGTGTATTCAAAGGAGTTTTAAAAGATGGAACAGTAGTAGCTGTTAAAAGGGCTATAGTATCTCTTTCTCCTCCCAACAACATGCACAAGAATAACAAAGAATTTCACACTGAACTTGACTTACTCTCAAGATTAAATCATGCTCATTTGCTCAATTTGCTAGGCTATTGCCAAGAAGGTGGCGAAAGACTTCTTGTTTATGAGTTCATGGCTCATGGATCTTTGTATCAACACCTTCATGGACCAAATCAAGTGTTGAAACAGGAATTAAACTGGATAAGAAGGGTAACAATAGCAGTTCAAGCTGCTCGTGGGATCGAATATTTACACGGCTACGCTTGTCCACCGGTGATTCATAGAGACATTAAGTCATCAAACATACTCATTGATGAAGAACACAATGCAAGAGTTTCGGATTTTGGTTTATCATTGTTAGGTCCTTTAGATAGTAATTCTCCACTTGCCGAGCTACCGGCCGGAACTCTCGGTTACCTTGATCCTGAATACTATAGACTCCATTACCTCACAACAAAATCCGATGTCTATAGTTTTGGTGTTCTACTCTTGGAAATTCTAAGTGGTAGAAAAGCCATTGACATGATGCAATATGAAGAAGGAAATAACATAGTTGAATGGGCAGTGCCTTTGATCAAATCAGGTGATATATCTGCAATATTGGATCCAATTCTTAAACCACCTCGTGAAATGGAAGCGTTGAAAAAGATAGCTAATGTAGCTTGTAAATGTGTGAGAATGAGAGGAAAAGAGAGACCTTCAATGGACAAAGTAACAACTTCATTAGAAAGATCTCTTGCTGTGTTAATGGGTAGTCCATGCATTGATCAACCAATTTTACCTACTGAGGTTGTTTTAGGAAGTAATAGAATGCATAGAAAATCATCTCAAATGTCTTCAAATAGATCAGTTTCTGAAATTGAGGATCAAAGATTTGAGCTTAGAGCACCTTCATGGATAACATTTCCTAGTGTTGCATCTTCTCTAAGAAGAAAATCATCAATGTCAGAAGCAGATGTTGATGGAAAAATTGCAGAAATGAAGATTAATATTGGCAATGTTGGAGGGAGTAGTGATATGTTGAGAAGTTTAGAGGAAGAGATTGTACCTGCTTCACCACAAGAGAGGTTGTTTTTGGAACATAACTTTTAA 2736 0.3735 MGFSARHFSIYGLNILFELVVLISYFCCQVYSLGSMSSIAVSYGEKGSVFCGLKSDGSHTVTCYGSNSAIIYETPTHFSFLGLTAGDGFVCGLLMDSNQPYCWGNSGYIEMGVPQPMIKKAQYLEISAGDYHVCGLRKPWKKNVSLVDCWGYNMTKSYMFDGMIQSISAGSVFHCGLFSNNRSVFCWGDETSSKVISLTPLKMKFKMISAGGYHVCGILEGVNSRTFCWGRSLDIEEQISVTHAGQGNVDLAPNDPMISIVGGRFHACGIKSSDNGVICWGFMIKSSTSAPSEVKVYGIAAGDYFTCGVLAGKKSLVPFCWGVDFPTSLPLAVLPGICKPFPCPHGFYEFDQKGLCKFPNSGVCMPCSGDCPIEMYQKSVCNLASDRVCEYNCSACSSHECFLHCSYSYSNVGNEKKNEKFWALQLPVVIAEIGFVLFIVSIASLTSVLYVRHRLRDCECSARLKKAKKLNRSSSLQNENQRKIRPEMEELQLRKAQRFTYEELETATSGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIVSLSPPNNMHKNNKEFHTELDLLSRLNHAHLLNLLGYCQEGGERLLVYEFMAHGSLYQHLHGPNQVLKQELNWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVSDFGLSLLGPLDSNSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMMQYEEGNNIVEWAVPLIKSGDISAILDPILKPPREMEALKKIANVACKCVRMRGKERPSMDKVTTSLERSLAVLMGSPCIDQPILPTEVVLGSNRMHRKSSQMSSNRSVSEIEDQRFELRAPSWITFPSVASSLRRKSSMSEADVDGKIAEMKINIGNVGGSSDMLRSLEEEIVPASPQERLFLEHNF* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2200 911 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Tpr3g2200 911 Gene3D - 85 335 IPR009091 -
Tpr3g2200 911 Gene3D Transferase(Phosphotransferase) domain 1 593 797 - -
Tpr3g2200 911 SUPERFAMILY RCC1/BLIP-II 32 282 IPR009091 -
Tpr3g2200 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Tpr3g2200 911 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 342 389 IPR001368 GO:0005515
Tpr3g2200 911 SMART serkin_6 511 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2200 911 Gene3D Phosphorylase Kinase; domain 1 480 592 - -
Tpr3g2200 911 SUPERFAMILY Protein kinase-like (PK-like) 488 790 IPR011009 -
Tpr3g2200 911 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 14 911 - -
Tpr3g2200 911 PANTHER RECEPTOR-LIKE KINASE 14 911 - -
Tpr3g2200 911 ProSiteProfiles Protein kinase domain profile. 511 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2200 911 Pfam Protein tyrosine and serine/threonine kinase 514 789 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2200 Tpr-Chr3 20626371 20629632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2200 15 911 Receptor kinase-like Gene Family AT3G59420 65.308 0.0 1167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Tpr3g2200 PK_Tyr_Ser-Thr 3.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2200 - - gmx:100797455 1468.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2200 3 20626371 20629632 Tpr7g4579 7 54270461 54274389 PCT