Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2199 ATGGGGCACAAGAAGAAGCGTGGTGGAGGTGGTGGTGGAGGAAGAAGAAACAAAGCAAGAACACCTTCCAAAGACCACACTTCTCCATTCAGTCACGATGATCATAACGAACAACTCTCCGAAGAGATTACTGCACTGTGTGCGATTTTCCAAGAGGATTGTGAATTTGTTCCTGGTTCGCCTCCTCAAGTAGTTATTAAGCTAAGGCCTTACTCGAATGACATGGGTTATGAGGACGTGGATGTTTCTGCTGTTCTTGTTGTTAGGTGCTTGCCTGGGTATCCCTTCAAGTGTCCCAAGTTGCAGATTACTCCTGAGATGGGTTTATCAGAAACTGATGCTAATAAACTTTTGTCTCTCCTCCTTGATCAGGCTAGTTTAAACGCTAGGGAAGGACGAGTAATGATCTTCAATTTAGTTGAGGCTGCTCAAGAATTTCTGTCTAGAATTGAGCCTATTGCCAAACCAACTGAATCCAAGTTTTTGCACTCAACTACAGAAGGCATTGAAGAATTGTGTCTCAAGGATATGACATCTTCAAATAAGAATAGATCTTTTGTTTATGGTTTCATCGACCTTTTCAGTGGCTATGGGGAGTCCTGGAATTGGAGTTTTGGAATTGATGAAACTGCTGTAAAAAGTTCTTCTCTTCCTTCTTCTAAGTTAGATGCCTCCAAGCCACGAATAGAAGCCTGGGAAAAGAAATCTGATAGCAAGGAAAACCCGTCCATATTGCAAGAACTTCCTGCCAAATTAGATACTGTTGGAGAAGTTAGTGAAGACAGTAACAATTGTTTATCTTTGACTCGTTCAAGTAGTTCAAGTAGTTCAAGTAGATCTCTGATGGATAATTTTATAGGGGACGGCAATGAAGACGAGTATACAACAGAAGATAACAAAGGCATGTCTGGAAGCGAGTCTACAGAGTCTCTTTCTTCTGCATCCTCACCTCATCACCAAGAAGCATCTCAAACAACAGAGAAGGATCTAATGATGGTTCACATGCTTCGCCTTGTTTGCGCCTCTAAAGGTACCTTGGCCGACTCTTTGCCGCAATTAGCAACAGAGCTGTACAACTTAGGGATCTTTTCTGACTCGGCACGTGATATGGCATCAAAACCGCCTTCCCTTTTCAACAAAACCTTTGATCATATCTTCAAGAAACAGCTGGCATCATCCAGAATATCTCAATTTTGGACACCTTCTTCTGATCTTGGAGACTCTAATACAGTTCACCATAGTTCTCGATATTTAAATGATTTTGAGGAGCTACGACCTCTTGGTCATGGTGGTTTTGGTCACGTTGTGCTGTGCAAAAATAAACTCGATGGAAGGCAGTATGCAATGAAGAAAATCCGCCTTAAGGACAAAAGCATGCCTGACCGAATATTAAGGGAGGTTGCTACACTTTCTCGTTTACAACATCAACATGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGGAGTTACAGATTCTTATGGTGATAGTGGTGGGGATTCAAGGACTCCAGCGAGCTCTACTTTCAGCTACAATGTTGCAAGCTCCAATGATGTTGTTGGGCGTGAGAATCAGCTTGAATCAACATATCTTTATATACAAATGGAGTACTGTCCCATGACTCTTCGCCAGATGTTTGAATCATATAATCATTTTGACAAAGAACTGGCATGGCATTTGTTTCGCCAAATAGTAGAAGGCTTGGCACACATACATGGGCAAGGAATAATTCATCGAGACTTAACACCAAGTAACATATTCTTTGATGCCCGTAATGATATTAAAATCGGTGACTTTGGTCTTGCCAAGTTCTTGAAGTTGGAGCAGCTCGATCAAGATTTAGCCCATCCTGCTGATACAACTGGAGTTTCCATTGATGGCACTGGACAAGTTGGGACATATTTTTATACAGCTCCTGAAATTGAGCAAGGATGGCCTAAGATTGATGAAAAGGCTGACATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCATCCATTTGGGACAGCAATGGAGAGACATGTTGTTTTATCCGATCTGAAACAAAAAGGGGAACTTCCACCTGCTTGGGTTGCTATGTTTCCAGAACAGGAATCCTTGCTGCGGCAGTTGATGTCTCTAGGTCCCTCAGATCGACCATCGGCCACTGAACTTCTGCAGAATAATGCATTTCCTCCACGAATGGAGTCTGAATTGTTGGACGATATCCTACGAACAATGCAGAAATCAGAGGATACTAGCATATATGATAAAGTCTTAAATGCTATCTTTGATGAAGAGATGTTAAGCACAAAACACATTCATCAGGTTGGTAGATTGGGGTCAGTTGGAGATAACAGTTCATCAATTCAGCACACAGATTTTGTAACTGAAGTCCGAGATTATGTTGTAGATGTCAACAAGGAAATTTTCAGGCAGCATTGTGCTAAACACCTAGAAATATCACCACTGCGATTATTGGATGATTGTCCACAGTTTAATAGAAATGCAGTAAAACTGTTGACTCAAGGAGGAAACATGCTTGAACTTTCCCATGAGCTGCGTTTGCCTTTTGTGAACTGGATTATATCTAACCAGAAATCTTCATTCAAACGATATGAGATATCATATGTTTACAGAAGAGCAGTTGGGCATTCATCACCAAACCGCTACCTTCAGGGAGATTTTGACATAATTGGTGGTACTTCAGCATTGGCAGAGGCAGAAGTCATCAAGGTCACGAAGGACATAGTCACTTGTTTTTTCCATGAAGACTCTTGTGACATTCATCTAAACCATGCTGACCTCCTGGGTGCAATTTGGTCATGGACTGGAATCAAGGTAGAACACAGAGTTAAAGTAGCTGAGCTTCTTTCAATGATGGGTTCTTTGCGTCCTCAATCCTCCGAAAGGAAGTCAAAATGGGTAGTGATAAGACGGCAGCTTTTGCAGGAACTGGGTTTAGATGAAGCTATGGTAAATAGGTTGCAGACTGTAGGTCTGAGATTCTGTGGATCTGCAGATCAGGCACTTCCCAGACTAAGAGGAGCTCTACCATCTGATAAGCGTACCTTCAAGGCACTTGATGAATTGTCTGAGCTTGCCAATCTCTTGAGAATTTGGAGGATTGACAAAAATGTATATATAGATGCATTAATGGCACCAAACGAAAGTTATCATAGAGATTTGTTTTTTCAGGTATACTTAAGGAAGGAGAACAGTTCTGGATCACTCTCTGAAGGTGTCTTGTTAGCTGTTGGTGGTCGATATGACAATTTGCTTCATCAATTGAGGAGTAGCGACTATAAAGGAAATCCTCCCACTGGTATGGGGACTAGCCTTGCACTAGAGACAATAATTCAGAATTGTCCTGTAGATTTTAAGCCCAGTCGAAATGAAGCCAGCACCAGTATTCTTGTGTGCTCGAGAGGAGGAGGTGGTCTGTTGGTGGAGCGCATGGAACTAGTTGCTGAATTGTGGCAGGAGAACTTTAAGGCCGAATTTGTTCCCGTCCCTGATCCAAGTCTTACAGAGCAGTATGAGTACGCTAATGAACATGATATCAAATGTCTCGTTATTATTACAGATGCAAGTTTCTCCCTGGCAGATTCGGTTAAGGTTCGGCATCTTGAGCTTAAGAAGGAGAAAAATGTTGAGAGAGATAACCTCGTCAAGTTTCTATCGGATGCTATGGCAACACAATTTAGAAACCCCTACATATGGATCTGA 3711 0.4188 MGHKKKRGGGGGGGRRNKARTPSKDHTSPFSHDDHNEQLSEEITALCAIFQEDCEFVPGSPPQVVIKLRPYSNDMGYEDVDVSAVLVVRCLPGYPFKCPKLQITPEMGLSETDANKLLSLLLDQASLNAREGRVMIFNLVEAAQEFLSRIEPIAKPTESKFLHSTTEGIEELCLKDMTSSNKNRSFVYGFIDLFSGYGESWNWSFGIDETAVKSSSLPSSKLDASKPRIEAWEKKSDSKENPSILQELPAKLDTVGEVSEDSNNCLSLTRSSSSSSSSRSLMDNFIGDGNEDEYTTEDNKGMSGSESTESLSSASSPHHQEASQTTEKDLMMVHMLRLVCASKGTLADSLPQLATELYNLGIFSDSARDMASKPPSLFNKTFDHIFKKQLASSRISQFWTPSSDLGDSNTVHHSSRYLNDFEELRPLGHGGFGHVVLCKNKLDGRQYAMKKIRLKDKSMPDRILREVATLSRLQHQHVVRYYQAWFETGVTDSYGDSGGDSRTPASSTFSYNVASSNDVVGRENQLESTYLYIQMEYCPMTLRQMFESYNHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPSNIFFDARNDIKIGDFGLAKFLKLEQLDQDLAHPADTTGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSDLKQKGELPPAWVAMFPEQESLLRQLMSLGPSDRPSATELLQNNAFPPRMESELLDDILRTMQKSEDTSIYDKVLNAIFDEEMLSTKHIHQVGRLGSVGDNSSSIQHTDFVTEVRDYVVDVNKEIFRQHCAKHLEISPLRLLDDCPQFNRNAVKLLTQGGNMLELSHELRLPFVNWIISNQKSSFKRYEISYVYRRAVGHSSPNRYLQGDFDIIGGTSALAEAEVIKVTKDIVTCFFHEDSCDIHLNHADLLGAIWSWTGIKVEHRVKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELGLDEAMVNRLQTVGLRFCGSADQALPRLRGALPSDKRTFKALDELSELANLLRIWRIDKNVYIDALMAPNESYHRDLFFQVYLRKENSSGSLSEGVLLAVGGRYDNLLHQLRSSDYKGNPPTGMGTSLALETIIQNCPVDFKPSRNEASTSILVCSRGGGGLLVERMELVAELWQENFKAEFVPVPDPSLTEQYEYANEHDIKCLVIITDASFSLADSVKVRHLELKKEKNVERDNLVKFLSDAMATQFRNPYIWI* 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2199 1236 SUPERFAMILY UBC-like 34 147 IPR016135 -
Tpr3g2199 1236 SMART RWD2001b 41 150 IPR006575 GO:0005515
Tpr3g2199 1236 SUPERFAMILY Class II aaRS ABD-related 1131 1226 - -
Tpr3g2199 1236 ProSiteProfiles RWD domain profile. 41 150 IPR006575 GO:0005515
Tpr3g2199 1236 Gene3D Phosphorylase Kinase; domain 1 408 537 - -
Tpr3g2199 1236 SUPERFAMILY Class II aaRS and biotin synthetases 791 1114 IPR045864 -
Tpr3g2199 1236 Pfam Histidyl-tRNA synthetase 873 1113 IPR041715 -
Tpr3g2199 1236 Pfam RWD domain 37 147 IPR006575 GO:0005515
Tpr3g2199 1236 CDD STKc_EIF2AK4_GCN2_rpt2 414 721 - -
Tpr3g2199 1236 Gene3D Transferase(Phosphotransferase) domain 1 540 731 - -
Tpr3g2199 1236 MobiDBLite consensus disorder prediction 289 325 - -
Tpr3g2199 1236 ProSitePatterns Tyrosine protein kinases specific active-site signature. 576 588 IPR008266 GO:0004672|GO:0006468
Tpr3g2199 1236 PANTHER HISTIDYL-TRNA SYNTHETASE 33 1236 - -
Tpr3g2199 1236 MobiDBLite consensus disorder prediction 18 36 - -
Tpr3g2199 1236 ProSitePatterns Protein kinases ATP-binding region signature. 427 450 IPR017441 GO:0005524
Tpr3g2199 1236 Gene3D Ubiquitin Conjugating Enzyme 28 156 IPR016135 -
Tpr3g2199 1236 PANTHER EIF-2-ALPHA KINASE GCN2 33 1236 - -
Tpr3g2199 1236 MobiDBLite consensus disorder prediction 1 36 - -
Tpr3g2199 1236 MobiDBLite consensus disorder prediction 300 321 - -
Tpr3g2199 1236 Pfam Protein kinase domain 421 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2199 1236 Gene3D Bira Bifunctional Protein; Domain 2 786 1119 IPR045864 -
Tpr3g2199 1236 ProSiteProfiles Protein kinase domain profile. 421 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2199 1236 Pfam Anticodon binding domain of tRNAs 1131 1228 IPR024435 -
Tpr3g2199 1236 SUPERFAMILY Protein kinase-like (PK-like) 417 769 IPR011009 -
Tpr3g2199 1236 Gene3D - 1127 1226 IPR036621 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2199 Tpr-Chr3 20605558 20622045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2199 410 725 MAP Kinase Kinase Kinase AT1G63700 26.235 7.16e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Tpr3g2199 Pkinase 6.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2199 K16196 - gmx:100797996 2007.65