Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2188 ATGGGAAGTTGCGTATCAACGCAAGGCAAAAATGGCGGACGAAAGAAATCAAAGGACAATCACAACAACAATAAACACAAAACCGATCAAAACATCGAGACTACTACACCTACCACATATAGATCAGGCTCCATGGCGCGTCCACTAAACGTCGTATCCAATCCTTGTCCTGGTAACATATTTGATAAATATGAATTAGGCAAAGAGCTTGGGAGAGGCGAATTTGGTGTGACAGTCCGTTGCGTGGATCTTAAAACGGGCGAGGCATTTGCTTGTAAGAAGATTTCAAAGACGAAACTTAGGACGGAGATTGATATTCAAGATGTGAGGAGAGAGGTTCAAATCATGAGACATTTGCCTCAACATCCTAATATTGTTGCTTTTAGAGAAGCTTATGAAGATAGAGATGCTGTTTATCTTGTTATGGAATTGTGTGAAGGTGGTGAACTTTTTGATAGGATTGTTGCTAAAGGTCATTATACAGAAAGAGCTGCTGCTAATGTTGCCAAAACCATTCTTGAAGTTTGCAAGGTGTGCCATGAACACGGTGTCATACATAGGGACTTAAAACCTGAAAATTTCTTATTTTCCGATGCAAGTGAGACAGCTTCGCTAAAGGCCATTGATTTTGGCCTTTCCACTTTCTATGTAAATGGCGATAGATTCAATGAAATTGTCGGAAGTCCCTATTACATGGCTCCTGAAGTTTTAAGACGTAACTATGGACAAGAAATCGATATCTGGAGCACAGGCGTTATCCTTTATATTTTACTTTGTGGAGTTCCACCCTTTTGGGCAGAAACCGAAGAAGCCATAGCACAGGCGATAATCCGGGGTCATGTAGATTTCACAAGAGATCCTTGGCCTAAAGTTTCAGATGAAGCCAAATACCTTGTTAAGCGTATGCTTGATCCAAATCCATTCACCAGAATCACAGTTCAAGAAGTTCTTGATCATTCATGGATACAACATAGGGAGCATGGTAGAAATGTTTCTCTTGGAGACCAAGTAAGAATGAGGATCAAACAATTCTCCTTGATGAACAGATTCAAAAAGAAAGTCCTTAGAGTGGTGGCTGATAACTTGCCAGATGAACAAATTGATGGATTTAGGCAAATGTTTGATATGATGGACAAGGATAAAAATGGTTACTTAACATTTGAAGAGCTTAAAGATGGCTTTCAAATGATTGGTCACATTATTCCTGATTCTGATATTCAGACATTAATAGATGCAGCAGATTGTGACGGAAACGGCACCTTGAATTGTGAAGATTTCATCACAATGAGTGTTCATTTAAGAAGAATTGGAAATGATGAGCATCTCACTGAAGCATTCAATTTCTTTGACAAGAATCAAACTGGATATGTTGAGTTTGATGAGTTGAAAGATGCCTTATCAGACGATGATTCAACCAACGACCAAGTGATCAAAGACATTCTAATCGATGTAGACTTGGACAAGGACGGAAGAATAAGTTTCGATGAGTTTAAGGCAATGATGAAGACGGGAGGAGATTGGAAAATGGCGTCTCGACAATATTCAAGAGCATTACTAAATGCATTAAGCTTCAGAATGTTTAGCAAATCTGGTGGAGTAGTAACTAATTAA 1611 0.3898 MGSCVSTQGKNGGRKKSKDNHNNNKHKTDQNIETTTPTTYRSGSMARPLNVVSNPCPGNIFDKYELGKELGRGEFGVTVRCVDLKTGEAFACKKISKTKLRTEIDIQDVRREVQIMRHLPQHPNIVAFREAYEDRDAVYLVMELCEGGELFDRIVAKGHYTERAAANVAKTILEVCKVCHEHGVIHRDLKPENFLFSDASETASLKAIDFGLSTFYVNGDRFNEIVGSPYYMAPEVLRRNYGQEIDIWSTGVILYILLCGVPPFWAETEEAIAQAIIRGHVDFTRDPWPKVSDEAKYLVKRMLDPNPFTRITVQEVLDHSWIQHREHGRNVSLGDQVRMRIKQFSLMNRFKKKVLRVVADNLPDEQIDGFRQMFDMMDKDKNGYLTFEELKDGFQMIGHIIPDSDIQTLIDAADCDGNGTLNCEDFITMSVHLRRIGNDEHLTEAFNFFDKNQTGYVEFDELKDALSDDDSTNDQVIKDILIDVDLDKDGRISFDEFKAMMKTGGDWKMASRQYSRALLNALSFRMFSKSGGVVTN* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2188 536 CDD STKc_CAMK 63 321 - -
Tpr3g2188 536 MobiDBLite consensus disorder prediction 29 43 - -
Tpr3g2188 536 PANTHER SERINE/THREONINE-PROTEIN KINASE 44 517 - -
Tpr3g2188 536 ProSitePatterns EF-hand calcium-binding domain. 485 497 IPR018247 -
Tpr3g2188 536 ProSiteProfiles EF-hand calcium-binding domain profile. 472 507 IPR002048 GO:0005509
Tpr3g2188 536 ProSitePatterns EF-hand calcium-binding domain. 414 426 IPR018247 -
Tpr3g2188 536 SUPERFAMILY EF-hand 350 514 IPR011992 -
Tpr3g2188 536 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 24 44 517 - -
Tpr3g2188 536 ProSiteProfiles EF-hand calcium-binding domain profile. 437 471 IPR002048 GO:0005509
Tpr3g2188 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Tpr3g2188 536 Gene3D Transferase(Phosphotransferase) domain 1 150 330 - -
Tpr3g2188 536 Pfam Protein kinase domain 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2188 536 SMART efh_1 441 469 IPR002048 GO:0005509
Tpr3g2188 536 SMART efh_1 369 397 IPR002048 GO:0005509
Tpr3g2188 536 SMART efh_1 405 433 IPR002048 GO:0005509
Tpr3g2188 536 SMART efh_1 476 504 IPR002048 GO:0005509
Tpr3g2188 536 CDD EFh 441 502 IPR002048 GO:0005509
Tpr3g2188 536 CDD EFh 370 429 IPR002048 GO:0005509
Tpr3g2188 536 ProSitePatterns EF-hand calcium-binding domain. 378 390 IPR018247 -
Tpr3g2188 536 MobiDBLite consensus disorder prediction 12 28 - -
Tpr3g2188 536 MobiDBLite consensus disorder prediction 1 43 - -
Tpr3g2188 536 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Tpr3g2188 536 Gene3D Phosphorylase Kinase; domain 1 66 149 - -
Tpr3g2188 536 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
Tpr3g2188 536 ProSiteProfiles Protein kinase domain profile. 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2188 536 Pfam EF-hand domain pair 440 502 IPR002048 GO:0005509
Tpr3g2188 536 SUPERFAMILY Protein kinase-like (PK-like) 60 323 IPR011009 -
Tpr3g2188 536 SMART serkin_6 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g2188 536 Gene3D - 331 504 - -
Tpr3g2188 536 Pfam EF-hand domain pair 382 432 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2188 Tpr-Chr3 20458984 20463135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2188 1 532 EF-hand Containing Proteins AT2G31500 67.100 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tpr3g2188 Pkinase 1.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2188 K13412 - gmx:100818929 849.351