Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2165 ATGACTCACCATCATAATTCAAATAAGGATTTCAAAGTAACAGATGATGAACTTCTTCAATCATTCCTCTACAACAAAATTCATGATAAACCTTTGCCCGATTATATGACCATTCTCGAATACGATTTATTCGGTACAGTAAAGAATCCTTGTGAAATTTGGGAAGAGTTTGCAGCTTCCCACTCATATAGTGGCAAAGACCTATATTTTTTCTCTACCTTAAAGAAGAAATCAGCCACTAGCACACGCATGGATCGAACTATCGGAACTGGTTCATGGGAAGGTGAAAACAGCGGAAAAAGTGTATTCGCCAAAAATACAAACCAACTCCTCGGTATAAAAAAACGTTATCGCTTTGAGAAAAGTAAGATGGATTCAGATGGTGGATGGATCTTGCACGAATATATCCTTGACCAATCTTTGATAAGCAATCCTTCGGCCAGTAATTATGTTCTATGTAGATTTAGAAAGAATTTGAAATTGGATACACAAAATACAGGAACAGGAATAAATCAACAATCCAATTCAAACAAAAATTCAAGAGCCAAGAATGTTGGACAAAATAAACAAAGAAAAACCGTTGTTACTCCATGTGCGGCGACAACAACCACCATAACTGGCAGTAATACTTTGTTGAGTAAAACTACAATTTATGAACCGATAAACGAATCAAATGGTGAACACTACAAGACAAATGTGGTTAATGAAGAGTCTCGATATAAAGAGGGAATGGATTCTCTCAAGTGTAATTTAAATATTTGGCCAAAAGAAACCAGCATCGTTCTTGCACTCGAGGCTATGACCAAATCTGAGAACAATAGTGAAATTAACAAAGAACATGTTGAATGCATTATGAACAAAGAAGATGATGGTGATATCATTATAGACACAGAAGAAGATGATAGCAAAGAAGAAGAGGGTGATGGCACTATTTCTTGGCCTAAGTATTTTTCACAAGAGTTGATAAACAAGAATGAAGGTTGTTTGAAGGGAGAGGAAAATGTTCCAATGATTTCCAATAATTTTAATAAAGAATTGTTGTTTGAAAGTCTCCTCAATAATAAGTAA 1068 0.3502 MTHHHNSNKDFKVTDDELLQSFLYNKIHDKPLPDYMTILEYDLFGTVKNPCEIWEEFAASHSYSGKDLYFFSTLKKKSATSTRMDRTIGTGSWEGENSGKSVFAKNTNQLLGIKKRYRFEKSKMDSDGGWILHEYILDQSLISNPSASNYVLCRFRKNLKLDTQNTGTGINQQSNSNKNSRAKNVGQNKQRKTVVTPCAATTTTITGSNTLLSKTTIYEPINESNGEHYKTNVVNEESRYKEGMDSLKCNLNIWPKETSIVLALEAMTKSENNSEINKEHVECIMNKEDDGDIIIDTEEDDSKEEEGDGTISWPKYFSQELINKNEGCLKGEENVPMISNNFNKELLFESLLNNK* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2165 355 SUPERFAMILY NAC domain 11 156 IPR036093 GO:0003677|GO:0006355
Tpr3g2165 355 ProSiteProfiles NAC domain profile. 5 158 IPR003441 GO:0003677|GO:0006355
Tpr3g2165 355 MobiDBLite consensus disorder prediction 166 192 - -
Tpr3g2165 355 Pfam No apical meristem (NAM) protein 10 136 IPR003441 GO:0003677|GO:0006355
Tpr3g2165 355 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 11 281 - -
Tpr3g2165 355 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 281 - -
Tpr3g2165 355 Gene3D NAC domain 14 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2165 Tpr-Chr3 19987260 19992686 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2165 11 159 NAC Transcription Factor Family AT5G62380 31.579 3.58e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr3g2165 NAM 7.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2165 - - cam:101507022 310.842